Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna3Q8R4G9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chrna3Q8R4G9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna3Q8R4G9 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna3Q8R4G9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna3Q8R4G9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna3Q8R4G9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna3Q8R4G9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.27■□□□□ 0.68
Chrna3Q8R4G9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chrna3Q8R4G9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Chrna3Q8R4G9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Chrna3Q8R4G9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chrna3Q8R4G9 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.27■□□□□ 0.67
Chrna3Q8R4G9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chrna3Q8R4G9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Chrna3Q8R4G9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna3Q8R4G9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna3Q8R4G9 Gm11421-201ENSMUST00000122124 294 ntBASIC19.26■□□□□ 0.67
Chrna3Q8R4G9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna3Q8R4G9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna3Q8R4G9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna3Q8R4G9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Chrna3Q8R4G9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Chrna3Q8R4G9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna3Q8R4G9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna3Q8R4G9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chrna3Q8R4G9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Chrna3Q8R4G9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Chrna3Q8R4G9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna3Q8R4G9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna3Q8R4G9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Chrna3Q8R4G9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna3Q8R4G9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna3Q8R4G9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna3Q8R4G9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna3Q8R4G9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chrna3Q8R4G9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna3Q8R4G9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna3Q8R4G9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna3Q8R4G9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.24■□□□□ 0.67
Chrna3Q8R4G9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna3Q8R4G9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna3Q8R4G9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna3Q8R4G9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna3Q8R4G9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chrna3Q8R4G9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna3Q8R4G9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna3Q8R4G9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna3Q8R4G9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna3Q8R4G9 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna3Q8R4G9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.23■□□□□ 0.67
Chrna3Q8R4G9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.23■□□□□ 0.67
Chrna3Q8R4G9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna3Q8R4G9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.23■□□□□ 0.67
Chrna3Q8R4G9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna3Q8R4G9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna3Q8R4G9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna3Q8R4G9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna3Q8R4G9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.23■□□□□ 0.67
Chrna3Q8R4G9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chrna3Q8R4G9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna3Q8R4G9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna3Q8R4G9 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna3Q8R4G9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Chrna3Q8R4G9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.22■□□□□ 0.67
Chrna3Q8R4G9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.22■□□□□ 0.67
Chrna3Q8R4G9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Chrna3Q8R4G9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.22■□□□□ 0.67
Chrna3Q8R4G9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chrna3Q8R4G9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna3Q8R4G9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna3Q8R4G9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna3Q8R4G9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.21■□□□□ 0.67
Chrna3Q8R4G9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna3Q8R4G9 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna3Q8R4G9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna3Q8R4G9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna3Q8R4G9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chrna3Q8R4G9 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.2■□□□□ 0.66
Chrna3Q8R4G9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Chrna3Q8R4G9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Chrna3Q8R4G9 Notumos-201ENSMUST00000151998 2659 ntBASIC19.2■□□□□ 0.66
Chrna3Q8R4G9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna3Q8R4G9 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna3Q8R4G9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Chrna3Q8R4G9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna3Q8R4G9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna3Q8R4G9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna3Q8R4G9 Gm18284-201ENSMUST00000172604 624 ntBASIC19.2■□□□□ 0.66
Chrna3Q8R4G9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna3Q8R4G9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna3Q8R4G9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chrna3Q8R4G9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna3Q8R4G9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.19■□□□□ 0.66
Chrna3Q8R4G9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna3Q8R4G9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.19■□□□□ 0.66
Chrna3Q8R4G9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna3Q8R4G9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chrna3Q8R4G9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Chrna3Q8R4G9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms