Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Atp2a1Q8R429 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.96■■□□□ 1.11
Atp2a1Q8R429 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Atp2a1Q8R429 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.96■■□□□ 1.11
Atp2a1Q8R429 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.96■■□□□ 1.11
Atp2a1Q8R429 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Atp2a1Q8R429 Gm29257-201ENSMUST00000186115 639 ntBASIC21.96■■□□□ 1.11
Atp2a1Q8R429 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Atp2a1Q8R429 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Atp2a1Q8R429 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Atp2a1Q8R429 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.95■■□□□ 1.11
Atp2a1Q8R429 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.95■■□□□ 1.1
Atp2a1Q8R429 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Atp2a1Q8R429 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Atp2a1Q8R429 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Atp2a1Q8R429 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Atp2a1Q8R429 Gm37179-201ENSMUST00000194862 823 ntBASIC21.95■■□□□ 1.1
Atp2a1Q8R429 AV356131-201ENSMUST00000206201 750 ntBASIC21.95■■□□□ 1.1
Atp2a1Q8R429 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Atp2a1Q8R429 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Atp2a1Q8R429 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.95■■□□□ 1.1
Atp2a1Q8R429 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.95■■□□□ 1.1
Atp2a1Q8R429 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Atp2a1Q8R429 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Atp2a1Q8R429 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Atp2a1Q8R429 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.94■■□□□ 1.1
Atp2a1Q8R429 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Atp2a1Q8R429 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Atp2a1Q8R429 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.94■■□□□ 1.1
Atp2a1Q8R429 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.94■■□□□ 1.1
Atp2a1Q8R429 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Atp2a1Q8R429 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Atp2a1Q8R429 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Atp2a1Q8R429 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Atp2a1Q8R429 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
Atp2a1Q8R429 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Atp2a1Q8R429 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Atp2a1Q8R429 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Atp2a1Q8R429 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Atp2a1Q8R429 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Atp2a1Q8R429 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Atp2a1Q8R429 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Atp2a1Q8R429 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Atp2a1Q8R429 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Atp2a1Q8R429 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Atp2a1Q8R429 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Atp2a1Q8R429 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.92■■□□□ 1.1
Atp2a1Q8R429 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Atp2a1Q8R429 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Atp2a1Q8R429 Gm42778-201ENSMUST00000199644 553 ntBASIC21.92■■□□□ 1.1
Atp2a1Q8R429 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.92■■□□□ 1.1
Atp2a1Q8R429 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Atp2a1Q8R429 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Atp2a1Q8R429 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Atp2a1Q8R429 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Atp2a1Q8R429 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Atp2a1Q8R429 Gm27801-201ENSMUST00000184174 223 ntBASIC21.91■■□□□ 1.1
Atp2a1Q8R429 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Atp2a1Q8R429 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Atp2a1Q8R429 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Atp2a1Q8R429 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Atp2a1Q8R429 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Atp2a1Q8R429 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Atp2a1Q8R429 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.9■■□□□ 1.1
Atp2a1Q8R429 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Atp2a1Q8R429 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Atp2a1Q8R429 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
Atp2a1Q8R429 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.9■■□□□ 1.1
Atp2a1Q8R429 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Atp2a1Q8R429 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Atp2a1Q8R429 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.9■■□□□ 1.1
Atp2a1Q8R429 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Atp2a1Q8R429 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
Atp2a1Q8R429 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Atp2a1Q8R429 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.89■■□□□ 1.1
Atp2a1Q8R429 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Atp2a1Q8R429 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Atp2a1Q8R429 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.89■■□□□ 1.09
Atp2a1Q8R429 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Atp2a1Q8R429 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Atp2a1Q8R429 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Atp2a1Q8R429 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Atp2a1Q8R429 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.89■■□□□ 1.09
Atp2a1Q8R429 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Atp2a1Q8R429 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Atp2a1Q8R429 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Atp2a1Q8R429 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Atp2a1Q8R429 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atp2a1Q8R429 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atp2a1Q8R429 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Atp2a1Q8R429 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atp2a1Q8R429 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.88■■□□□ 1.09
Atp2a1Q8R429 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atp2a1Q8R429 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Atp2a1Q8R429 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Atp2a1Q8R429 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Atp2a1Q8R429 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Atp2a1Q8R429 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Atp2a1Q8R429 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
Atp2a1Q8R429 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms