Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.58■□□□□ 0.72
Zcchc9Q8R1J3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Zcchc9Q8R1J3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.58■□□□□ 0.72
Zcchc9Q8R1J3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Zcchc9Q8R1J3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Zcchc9Q8R1J3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Zcchc9Q8R1J3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Zcchc9Q8R1J3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.57■□□□□ 0.72
Zcchc9Q8R1J3 Gm42778-201ENSMUST00000199644 553 ntBASIC19.57■□□□□ 0.72
Zcchc9Q8R1J3 AV356131-201ENSMUST00000206201 750 ntBASIC19.57■□□□□ 0.72
Zcchc9Q8R1J3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Zcchc9Q8R1J3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Zcchc9Q8R1J3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.57■□□□□ 0.72
Zcchc9Q8R1J3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Zcchc9Q8R1J3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Zcchc9Q8R1J3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Zcchc9Q8R1J3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.56■□□□□ 0.72
Zcchc9Q8R1J3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Zcchc9Q8R1J3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Zcchc9Q8R1J3 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.56■□□□□ 0.72
Zcchc9Q8R1J3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Zcchc9Q8R1J3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Zcchc9Q8R1J3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Zcchc9Q8R1J3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Zcchc9Q8R1J3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Zcchc9Q8R1J3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Zcchc9Q8R1J3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Zcchc9Q8R1J3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Zcchc9Q8R1J3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Zcchc9Q8R1J3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Zcchc9Q8R1J3 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Zcchc9Q8R1J3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Zcchc9Q8R1J3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Zcchc9Q8R1J3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Zcchc9Q8R1J3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Zcchc9Q8R1J3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Zcchc9Q8R1J3 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Zcchc9Q8R1J3 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Zcchc9Q8R1J3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.54■□□□□ 0.72
Zcchc9Q8R1J3 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.54■□□□□ 0.72
Zcchc9Q8R1J3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.54■□□□□ 0.72
Zcchc9Q8R1J3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Zcchc9Q8R1J3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Zcchc9Q8R1J3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Zcchc9Q8R1J3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Zcchc9Q8R1J3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.53■□□□□ 0.72
Zcchc9Q8R1J3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Zcchc9Q8R1J3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Zcchc9Q8R1J3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Zcchc9Q8R1J3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Zcchc9Q8R1J3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.52■□□□□ 0.72
Zcchc9Q8R1J3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Zcchc9Q8R1J3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Zcchc9Q8R1J3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Zcchc9Q8R1J3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
Zcchc9Q8R1J3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.52■□□□□ 0.72
Zcchc9Q8R1J3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Zcchc9Q8R1J3 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Zcchc9Q8R1J3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Zcchc9Q8R1J3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Zcchc9Q8R1J3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Zcchc9Q8R1J3 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Zcchc9Q8R1J3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.52■□□□□ 0.72
Zcchc9Q8R1J3 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Zcchc9Q8R1J3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Zcchc9Q8R1J3 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Zcchc9Q8R1J3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Zcchc9Q8R1J3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Zcchc9Q8R1J3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Zcchc9Q8R1J3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.51■□□□□ 0.71
Zcchc9Q8R1J3 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Zcchc9Q8R1J3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.51■□□□□ 0.71
Zcchc9Q8R1J3 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.51■□□□□ 0.71
Zcchc9Q8R1J3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Zcchc9Q8R1J3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Zcchc9Q8R1J3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Zcchc9Q8R1J3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Zcchc9Q8R1J3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Zcchc9Q8R1J3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Zcchc9Q8R1J3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Zcchc9Q8R1J3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Zcchc9Q8R1J3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.5■□□□□ 0.71
Zcchc9Q8R1J3 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Zcchc9Q8R1J3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Zcchc9Q8R1J3 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Zcchc9Q8R1J3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Zcchc9Q8R1J3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Zcchc9Q8R1J3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Zcchc9Q8R1J3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zcchc9Q8R1J3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Zcchc9Q8R1J3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zcchc9Q8R1J3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zcchc9Q8R1J3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zcchc9Q8R1J3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Zcchc9Q8R1J3 Golph3-202ENSMUST00000226517 2359 ntBASIC19.49■□□□□ 0.71
Zcchc9Q8R1J3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Zcchc9Q8R1J3 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.48■□□□□ 0.71
Zcchc9Q8R1J3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Zcchc9Q8R1J3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.48■□□□□ 0.71
Zcchc9Q8R1J3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms