Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Vopp1Q8R1C3 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Vopp1Q8R1C3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Vopp1Q8R1C3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Vopp1Q8R1C3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vopp1Q8R1C3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vopp1Q8R1C3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vopp1Q8R1C3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vopp1Q8R1C3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
Vopp1Q8R1C3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Vopp1Q8R1C3 Gm13146-201ENSMUST00000118508 780 ntBASIC21.19■□□□□ 0.98
Vopp1Q8R1C3 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.19■□□□□ 0.98
Vopp1Q8R1C3 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.19■□□□□ 0.98
Vopp1Q8R1C3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Vopp1Q8R1C3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vopp1Q8R1C3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vopp1Q8R1C3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vopp1Q8R1C3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vopp1Q8R1C3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vopp1Q8R1C3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Vopp1Q8R1C3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.18■□□□□ 0.98
Vopp1Q8R1C3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vopp1Q8R1C3 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.18■□□□□ 0.98
Vopp1Q8R1C3 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vopp1Q8R1C3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vopp1Q8R1C3 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.18■□□□□ 0.98
Vopp1Q8R1C3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Vopp1Q8R1C3 AA386476-201ENSMUST00000098781 1665 ntBASIC21.18■□□□□ 0.98
Vopp1Q8R1C3 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.17■□□□□ 0.98
Vopp1Q8R1C3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vopp1Q8R1C3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.16■□□□□ 0.98
Vopp1Q8R1C3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vopp1Q8R1C3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vopp1Q8R1C3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vopp1Q8R1C3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Vopp1Q8R1C3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Vopp1Q8R1C3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vopp1Q8R1C3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
Vopp1Q8R1C3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Vopp1Q8R1C3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vopp1Q8R1C3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Vopp1Q8R1C3 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.15■□□□□ 0.98
Vopp1Q8R1C3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.15■□□□□ 0.98
Vopp1Q8R1C3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC21.15■□□□□ 0.98
Vopp1Q8R1C3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.15■□□□□ 0.98
Vopp1Q8R1C3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Vopp1Q8R1C3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.15■□□□□ 0.98
Vopp1Q8R1C3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vopp1Q8R1C3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC21.14■□□□□ 0.97
Vopp1Q8R1C3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.14■□□□□ 0.97
Vopp1Q8R1C3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.13■□□□□ 0.97
Vopp1Q8R1C3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Vopp1Q8R1C3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.13■□□□□ 0.97
Vopp1Q8R1C3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Vopp1Q8R1C3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vopp1Q8R1C3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vopp1Q8R1C3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vopp1Q8R1C3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vopp1Q8R1C3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.12■□□□□ 0.97
Vopp1Q8R1C3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Vopp1Q8R1C3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vopp1Q8R1C3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Vopp1Q8R1C3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vopp1Q8R1C3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vopp1Q8R1C3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vopp1Q8R1C3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.11■□□□□ 0.97
Vopp1Q8R1C3 Gm38205-201ENSMUST00000192243 258 ntBASIC21.11■□□□□ 0.97
Vopp1Q8R1C3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vopp1Q8R1C3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vopp1Q8R1C3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vopp1Q8R1C3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Vopp1Q8R1C3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Vopp1Q8R1C3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Vopp1Q8R1C3 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vopp1Q8R1C3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Vopp1Q8R1C3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Vopp1Q8R1C3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vopp1Q8R1C3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Vopp1Q8R1C3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.09■□□□□ 0.97
Vopp1Q8R1C3 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.09■□□□□ 0.97
Vopp1Q8R1C3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Vopp1Q8R1C3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Vopp1Q8R1C3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vopp1Q8R1C3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vopp1Q8R1C3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vopp1Q8R1C3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Vopp1Q8R1C3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vopp1Q8R1C3 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Vopp1Q8R1C3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Vopp1Q8R1C3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Vopp1Q8R1C3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Vopp1Q8R1C3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Vopp1Q8R1C3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Vopp1Q8R1C3 Gm7514-201ENSMUST00000209475 934 ntBASIC21.07■□□□□ 0.96
Vopp1Q8R1C3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Vopp1Q8R1C3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.06■□□□□ 0.96
Vopp1Q8R1C3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Vopp1Q8R1C3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Vopp1Q8R1C3 Gm12933-201ENSMUST00000120203 872 ntBASIC21.06■□□□□ 0.96
Vopp1Q8R1C3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms