Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Sf3a1Q8K4Z5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Sf3a1Q8K4Z5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Sf3a1Q8K4Z5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC24.04■■□□□ 1.44
Sf3a1Q8K4Z5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Sf3a1Q8K4Z5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sf3a1Q8K4Z5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sf3a1Q8K4Z5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sf3a1Q8K4Z5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC24.03■■□□□ 1.44
Sf3a1Q8K4Z5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sf3a1Q8K4Z5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC24.03■■□□□ 1.44
Sf3a1Q8K4Z5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Sf3a1Q8K4Z5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Sf3a1Q8K4Z5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sf3a1Q8K4Z5 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC24.03■■□□□ 1.44
Sf3a1Q8K4Z5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sf3a1Q8K4Z5 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sf3a1Q8K4Z5 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Sf3a1Q8K4Z5 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Sf3a1Q8K4Z5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sf3a1Q8K4Z5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sf3a1Q8K4Z5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sf3a1Q8K4Z5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sf3a1Q8K4Z5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Sf3a1Q8K4Z5 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC24.02■■□□□ 1.44
Sf3a1Q8K4Z5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC24.02■■□□□ 1.44
Sf3a1Q8K4Z5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sf3a1Q8K4Z5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sf3a1Q8K4Z5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sf3a1Q8K4Z5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Sf3a1Q8K4Z5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Sf3a1Q8K4Z5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Sf3a1Q8K4Z5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Sf3a1Q8K4Z5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
Sf3a1Q8K4Z5 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Sf3a1Q8K4Z5 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Sf3a1Q8K4Z5 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Sf3a1Q8K4Z5 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Sf3a1Q8K4Z5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Sf3a1Q8K4Z5 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC24■■□□□ 1.43
Sf3a1Q8K4Z5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Sf3a1Q8K4Z5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Sf3a1Q8K4Z5 Gm43017-201ENSMUST00000198296 752 ntBASIC24■■□□□ 1.43
Sf3a1Q8K4Z5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Sf3a1Q8K4Z5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
Sf3a1Q8K4Z5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Sf3a1Q8K4Z5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC24■■□□□ 1.43
Sf3a1Q8K4Z5 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Sf3a1Q8K4Z5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Sf3a1Q8K4Z5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Sf3a1Q8K4Z5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Sf3a1Q8K4Z5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC23.99■■□□□ 1.43
Sf3a1Q8K4Z5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC23.99■■□□□ 1.43
Sf3a1Q8K4Z5 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Sf3a1Q8K4Z5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Sf3a1Q8K4Z5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC23.99■■□□□ 1.43
Sf3a1Q8K4Z5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Sf3a1Q8K4Z5 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sf3a1Q8K4Z5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.98■■□□□ 1.43
Sf3a1Q8K4Z5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sf3a1Q8K4Z5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sf3a1Q8K4Z5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Sf3a1Q8K4Z5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sf3a1Q8K4Z5 AC165080.2-201ENSMUST00000217491 1530 ntBASIC23.98■■□□□ 1.43
Sf3a1Q8K4Z5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.98■■□□□ 1.43
Sf3a1Q8K4Z5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sf3a1Q8K4Z5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Sf3a1Q8K4Z5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Sf3a1Q8K4Z5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Sf3a1Q8K4Z5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Sf3a1Q8K4Z5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Sf3a1Q8K4Z5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Sf3a1Q8K4Z5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Sf3a1Q8K4Z5 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Sf3a1Q8K4Z5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Sf3a1Q8K4Z5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Sf3a1Q8K4Z5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Sf3a1Q8K4Z5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Sf3a1Q8K4Z5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Sf3a1Q8K4Z5 Smad6-203ENSMUST00000179458 273 ntBASIC23.96■■□□□ 1.43
Sf3a1Q8K4Z5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Sf3a1Q8K4Z5 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Sf3a1Q8K4Z5 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC23.96■■□□□ 1.43
Sf3a1Q8K4Z5 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
Sf3a1Q8K4Z5 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Sf3a1Q8K4Z5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Sf3a1Q8K4Z5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Sf3a1Q8K4Z5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Sf3a1Q8K4Z5 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Sf3a1Q8K4Z5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC23.95■■□□□ 1.42
Sf3a1Q8K4Z5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Sf3a1Q8K4Z5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Sf3a1Q8K4Z5 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Sf3a1Q8K4Z5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.94■■□□□ 1.42
Sf3a1Q8K4Z5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Sf3a1Q8K4Z5 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Sf3a1Q8K4Z5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.94■■□□□ 1.42
Sf3a1Q8K4Z5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Sf3a1Q8K4Z5 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC23.94■■□□□ 1.42
Sf3a1Q8K4Z5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms