Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alms1Q8K4E0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alms1Q8K4E0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alms1Q8K4E0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alms1Q8K4E0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Alms1Q8K4E0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Alms1Q8K4E0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alms1Q8K4E0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Alms1Q8K4E0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alms1Q8K4E0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.34■□□□□ 0.69
Alms1Q8K4E0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alms1Q8K4E0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alms1Q8K4E0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alms1Q8K4E0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Alms1Q8K4E0 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Alms1Q8K4E0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
Alms1Q8K4E0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.34■□□□□ 0.69
Alms1Q8K4E0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Alms1Q8K4E0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Alms1Q8K4E0 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.33■□□□□ 0.69
Alms1Q8K4E0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Alms1Q8K4E0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Alms1Q8K4E0 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.33■□□□□ 0.68
Alms1Q8K4E0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Alms1Q8K4E0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Alms1Q8K4E0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.33■□□□□ 0.68
Alms1Q8K4E0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Alms1Q8K4E0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Alms1Q8K4E0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Alms1Q8K4E0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Alms1Q8K4E0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Alms1Q8K4E0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Alms1Q8K4E0 Gm4968-201ENSMUST00000071458 858 ntBASIC19.32■□□□□ 0.68
Alms1Q8K4E0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Alms1Q8K4E0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Alms1Q8K4E0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Alms1Q8K4E0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Alms1Q8K4E0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.32■□□□□ 0.68
Alms1Q8K4E0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.31■□□□□ 0.68
Alms1Q8K4E0 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alms1Q8K4E0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.31■□□□□ 0.68
Alms1Q8K4E0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alms1Q8K4E0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Alms1Q8K4E0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alms1Q8K4E0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Alms1Q8K4E0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alms1Q8K4E0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alms1Q8K4E0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alms1Q8K4E0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alms1Q8K4E0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alms1Q8K4E0 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.31■□□□□ 0.68
Alms1Q8K4E0 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.31■□□□□ 0.68
Alms1Q8K4E0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Alms1Q8K4E0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Alms1Q8K4E0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Alms1Q8K4E0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Alms1Q8K4E0 Gm22240-201ENSMUST00000175225 82 ntBASIC19.3■□□□□ 0.68
Alms1Q8K4E0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.3■□□□□ 0.68
Alms1Q8K4E0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Alms1Q8K4E0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Alms1Q8K4E0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
Alms1Q8K4E0 Gm9988-201ENSMUST00000069786 435 ntBASIC19.3■□□□□ 0.68
Alms1Q8K4E0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Alms1Q8K4E0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.29■□□□□ 0.68
Alms1Q8K4E0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Alms1Q8K4E0 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.29■□□□□ 0.68
Alms1Q8K4E0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Alms1Q8K4E0 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Alms1Q8K4E0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Alms1Q8K4E0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Alms1Q8K4E0 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Alms1Q8K4E0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Alms1Q8K4E0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Alms1Q8K4E0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Alms1Q8K4E0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Alms1Q8K4E0 Gm7977-201ENSMUST00000193787 748 ntBASIC19.29■□□□□ 0.68
Alms1Q8K4E0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Alms1Q8K4E0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Alms1Q8K4E0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Alms1Q8K4E0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Alms1Q8K4E0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Alms1Q8K4E0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Alms1Q8K4E0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.27■□□□□ 0.68
Alms1Q8K4E0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Alms1Q8K4E0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Alms1Q8K4E0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Alms1Q8K4E0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Alms1Q8K4E0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Alms1Q8K4E0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.27■□□□□ 0.68
Alms1Q8K4E0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Alms1Q8K4E0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Alms1Q8K4E0 Mir5133-201ENSMUST00000174955 77 ntBASIC19.27■□□□□ 0.67
Alms1Q8K4E0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.27■□□□□ 0.67
Alms1Q8K4E0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.27■□□□□ 0.67
Alms1Q8K4E0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Alms1Q8K4E0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Alms1Q8K4E0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Alms1Q8K4E0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Alms1Q8K4E0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Alms1Q8K4E0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms