Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clrn1Q8K445 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Clrn1Q8K445 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Clrn1Q8K445 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
Clrn1Q8K445 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clrn1Q8K445 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clrn1Q8K445 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clrn1Q8K445 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clrn1Q8K445 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clrn1Q8K445 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clrn1Q8K445 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.51■□□□□ 0.55
Clrn1Q8K445 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clrn1Q8K445 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Clrn1Q8K445 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clrn1Q8K445 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn1Q8K445 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn1Q8K445 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn1Q8K445 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn1Q8K445 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn1Q8K445 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn1Q8K445 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn1Q8K445 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.5■□□□□ 0.55
Clrn1Q8K445 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn1Q8K445 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn1Q8K445 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Clrn1Q8K445 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clrn1Q8K445 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clrn1Q8K445 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Clrn1Q8K445 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clrn1Q8K445 Gm12821-201ENSMUST00000120022 600 ntBASIC18.49■□□□□ 0.55
Clrn1Q8K445 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.49■□□□□ 0.55
Clrn1Q8K445 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clrn1Q8K445 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clrn1Q8K445 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clrn1Q8K445 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clrn1Q8K445 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clrn1Q8K445 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clrn1Q8K445 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Clrn1Q8K445 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Clrn1Q8K445 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Clrn1Q8K445 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Clrn1Q8K445 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Clrn1Q8K445 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.48■□□□□ 0.55
Clrn1Q8K445 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Clrn1Q8K445 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.48■□□□□ 0.55
Clrn1Q8K445 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn1Q8K445 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn1Q8K445 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn1Q8K445 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.47■□□□□ 0.55
Clrn1Q8K445 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn1Q8K445 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn1Q8K445 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.47■□□□□ 0.55
Clrn1Q8K445 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.47■□□□□ 0.55
Clrn1Q8K445 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Clrn1Q8K445 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn1Q8K445 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Clrn1Q8K445 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn1Q8K445 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn1Q8K445 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Clrn1Q8K445 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.47■□□□□ 0.55
Clrn1Q8K445 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clrn1Q8K445 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clrn1Q8K445 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clrn1Q8K445 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Clrn1Q8K445 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clrn1Q8K445 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Clrn1Q8K445 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.46■□□□□ 0.55
Clrn1Q8K445 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clrn1Q8K445 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.46■□□□□ 0.55
Clrn1Q8K445 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Clrn1Q8K445 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.45■□□□□ 0.54
Clrn1Q8K445 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clrn1Q8K445 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clrn1Q8K445 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Clrn1Q8K445 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clrn1Q8K445 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clrn1Q8K445 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Clrn1Q8K445 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clrn1Q8K445 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Clrn1Q8K445 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Clrn1Q8K445 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Clrn1Q8K445 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Clrn1Q8K445 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.45■□□□□ 0.54
Clrn1Q8K445 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clrn1Q8K445 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Clrn1Q8K445 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clrn1Q8K445 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clrn1Q8K445 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clrn1Q8K445 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clrn1Q8K445 Gm27454-201ENSMUST00000185090 204 ntBASIC18.44■□□□□ 0.54
Clrn1Q8K445 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.44■□□□□ 0.54
Clrn1Q8K445 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clrn1Q8K445 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clrn1Q8K445 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Clrn1Q8K445 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Clrn1Q8K445 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clrn1Q8K445 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clrn1Q8K445 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Clrn1Q8K445 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Clrn1Q8K445 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms