Protein–RNA interactions for Protein: Q8CII9

Crlf2, Cytokine receptor-like factor 2, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf2Q8CII9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Crlf2Q8CII9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Crlf2Q8CII9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Crlf2Q8CII9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.22■□□□□ 0.99
Crlf2Q8CII9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC21.22■□□□□ 0.99
Crlf2Q8CII9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC21.22■□□□□ 0.99
Crlf2Q8CII9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Crlf2Q8CII9 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.22■□□□□ 0.99
Crlf2Q8CII9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Crlf2Q8CII9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Crlf2Q8CII9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Crlf2Q8CII9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Crlf2Q8CII9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Crlf2Q8CII9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Crlf2Q8CII9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Crlf2Q8CII9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Crlf2Q8CII9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Crlf2Q8CII9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Crlf2Q8CII9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.21■□□□□ 0.99
Crlf2Q8CII9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.21■□□□□ 0.99
Crlf2Q8CII9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Crlf2Q8CII9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.21■□□□□ 0.99
Crlf2Q8CII9 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.21■□□□□ 0.99
Crlf2Q8CII9 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC21.21■□□□□ 0.99
Crlf2Q8CII9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Crlf2Q8CII9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Crlf2Q8CII9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Crlf2Q8CII9 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Crlf2Q8CII9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Crlf2Q8CII9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Crlf2Q8CII9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Crlf2Q8CII9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Crlf2Q8CII9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Crlf2Q8CII9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
Crlf2Q8CII9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.2■□□□□ 0.98
Crlf2Q8CII9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Crlf2Q8CII9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC21.2■□□□□ 0.98
Crlf2Q8CII9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Crlf2Q8CII9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Crlf2Q8CII9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Crlf2Q8CII9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.2■□□□□ 0.98
Crlf2Q8CII9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Crlf2Q8CII9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Crlf2Q8CII9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Crlf2Q8CII9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Crlf2Q8CII9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Crlf2Q8CII9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Crlf2Q8CII9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Crlf2Q8CII9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Crlf2Q8CII9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Crlf2Q8CII9 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Crlf2Q8CII9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Crlf2Q8CII9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Crlf2Q8CII9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.19■□□□□ 0.98
Crlf2Q8CII9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Crlf2Q8CII9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Crlf2Q8CII9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Crlf2Q8CII9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Crlf2Q8CII9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Crlf2Q8CII9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Crlf2Q8CII9 Gm9484-201ENSMUST00000195892 1159 ntBASIC21.18■□□□□ 0.98
Crlf2Q8CII9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Crlf2Q8CII9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Crlf2Q8CII9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Crlf2Q8CII9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Crlf2Q8CII9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.18■□□□□ 0.98
Crlf2Q8CII9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Crlf2Q8CII9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Crlf2Q8CII9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Crlf2Q8CII9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Crlf2Q8CII9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Crlf2Q8CII9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Crlf2Q8CII9 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Crlf2Q8CII9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Crlf2Q8CII9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Crlf2Q8CII9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.16■□□□□ 0.98
Crlf2Q8CII9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Crlf2Q8CII9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Crlf2Q8CII9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Crlf2Q8CII9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Crlf2Q8CII9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Crlf2Q8CII9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.16■□□□□ 0.98
Crlf2Q8CII9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Crlf2Q8CII9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Crlf2Q8CII9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Crlf2Q8CII9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC21.15■□□□□ 0.98
Crlf2Q8CII9 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.15■□□□□ 0.98
Crlf2Q8CII9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Crlf2Q8CII9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC21.15■□□□□ 0.98
Crlf2Q8CII9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Crlf2Q8CII9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Crlf2Q8CII9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Crlf2Q8CII9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Crlf2Q8CII9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Crlf2Q8CII9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
Crlf2Q8CII9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Crlf2Q8CII9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
Crlf2Q8CII9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Crlf2Q8CII9 Gm13534-201ENSMUST00000121169 513 ntBASIC21.14■□□□□ 0.97
Crlf2Q8CII9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms