Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.28■■□□□ 1.16
Depdc1aQ8CIG0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Depdc1aQ8CIG0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Depdc1aQ8CIG0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Depdc1aQ8CIG0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Depdc1aQ8CIG0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Depdc1aQ8CIG0 Gm42569-201ENSMUST00000200539 472 ntBASIC22.28■■□□□ 1.16
Depdc1aQ8CIG0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Depdc1aQ8CIG0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Depdc1aQ8CIG0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Depdc1aQ8CIG0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Depdc1aQ8CIG0 AC154266.1-201ENSMUST00000223190 503 ntBASIC22.27■■□□□ 1.16
Depdc1aQ8CIG0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Depdc1aQ8CIG0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Depdc1aQ8CIG0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
Depdc1aQ8CIG0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Depdc1aQ8CIG0 Gm9988-201ENSMUST00000069786 435 ntBASIC22.26■■□□□ 1.15
Depdc1aQ8CIG0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Depdc1aQ8CIG0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Depdc1aQ8CIG0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Depdc1aQ8CIG0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Depdc1aQ8CIG0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Depdc1aQ8CIG0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Depdc1aQ8CIG0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Depdc1aQ8CIG0 Gm18671-201ENSMUST00000214826 683 ntBASIC22.25■■□□□ 1.15
Depdc1aQ8CIG0 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
Depdc1aQ8CIG0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Depdc1aQ8CIG0 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.25■■□□□ 1.15
Depdc1aQ8CIG0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Depdc1aQ8CIG0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Depdc1aQ8CIG0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Depdc1aQ8CIG0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Depdc1aQ8CIG0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Depdc1aQ8CIG0 Gm7291-201ENSMUST00000199147 382 ntBASIC22.24■■□□□ 1.15
Depdc1aQ8CIG0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC22.24■■□□□ 1.15
Depdc1aQ8CIG0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Depdc1aQ8CIG0 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC22.24■■□□□ 1.15
Depdc1aQ8CIG0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Depdc1aQ8CIG0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Depdc1aQ8CIG0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Depdc1aQ8CIG0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Depdc1aQ8CIG0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Depdc1aQ8CIG0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Depdc1aQ8CIG0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Depdc1aQ8CIG0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Depdc1aQ8CIG0 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Depdc1aQ8CIG0 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
Depdc1aQ8CIG0 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Depdc1aQ8CIG0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC22.23■■□□□ 1.15
Depdc1aQ8CIG0 Gm27405-201ENSMUST00000184201 112 ntBASIC22.23■■□□□ 1.15
Depdc1aQ8CIG0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC22.23■■□□□ 1.15
Depdc1aQ8CIG0 Gm42778-201ENSMUST00000199644 553 ntBASIC22.23■■□□□ 1.15
Depdc1aQ8CIG0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.23■■□□□ 1.15
Depdc1aQ8CIG0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Depdc1aQ8CIG0 Reep4-203ENSMUST00000226563 1444 ntBASIC22.23■■□□□ 1.15
Depdc1aQ8CIG0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Depdc1aQ8CIG0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Depdc1aQ8CIG0 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.22■■□□□ 1.15
Depdc1aQ8CIG0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Depdc1aQ8CIG0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Depdc1aQ8CIG0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Depdc1aQ8CIG0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Depdc1aQ8CIG0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Depdc1aQ8CIG0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Depdc1aQ8CIG0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Depdc1aQ8CIG0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.21■■□□□ 1.15
Depdc1aQ8CIG0 AV356131-201ENSMUST00000206201 750 ntBASIC22.21■■□□□ 1.15
Depdc1aQ8CIG0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Depdc1aQ8CIG0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Depdc1aQ8CIG0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Depdc1aQ8CIG0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Depdc1aQ8CIG0 Gm6802-201ENSMUST00000167843 1983 ntBASIC22.21■■□□□ 1.15
Depdc1aQ8CIG0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Depdc1aQ8CIG0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC22.2■■□□□ 1.15
Depdc1aQ8CIG0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Depdc1aQ8CIG0 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Depdc1aQ8CIG0 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC22.2■■□□□ 1.14
Depdc1aQ8CIG0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC22.2■■□□□ 1.14
Depdc1aQ8CIG0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Depdc1aQ8CIG0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Depdc1aQ8CIG0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Depdc1aQ8CIG0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Depdc1aQ8CIG0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Depdc1aQ8CIG0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Depdc1aQ8CIG0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Depdc1aQ8CIG0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Depdc1aQ8CIG0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Depdc1aQ8CIG0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Depdc1aQ8CIG0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Depdc1aQ8CIG0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Depdc1aQ8CIG0 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Depdc1aQ8CIG0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Depdc1aQ8CIG0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Depdc1aQ8CIG0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Depdc1aQ8CIG0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Depdc1aQ8CIG0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Depdc1aQ8CIG0 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.18■■□□□ 1.14
Depdc1aQ8CIG0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Depdc1aQ8CIG0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Depdc1aQ8CIG0 Gm13234-201ENSMUST00000120010 747 ntBASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms