Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip4Q8CI96 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip4Q8CI96 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clip4Q8CI96 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Clip4Q8CI96 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip4Q8CI96 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Clip4Q8CI96 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip4Q8CI96 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip4Q8CI96 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clip4Q8CI96 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Clip4Q8CI96 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip4Q8CI96 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clip4Q8CI96 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip4Q8CI96 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip4Q8CI96 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clip4Q8CI96 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.67■□□□□ 0.74
Clip4Q8CI96 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip4Q8CI96 Gm43530-201ENSMUST00000195920 274 ntBASIC19.67■□□□□ 0.74
Clip4Q8CI96 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.67■□□□□ 0.74
Clip4Q8CI96 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip4Q8CI96 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clip4Q8CI96 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip4Q8CI96 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip4Q8CI96 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip4Q8CI96 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Clip4Q8CI96 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clip4Q8CI96 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Clip4Q8CI96 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clip4Q8CI96 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip4Q8CI96 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip4Q8CI96 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip4Q8CI96 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Clip4Q8CI96 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip4Q8CI96 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Clip4Q8CI96 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Clip4Q8CI96 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip4Q8CI96 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clip4Q8CI96 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.66■□□□□ 0.74
Clip4Q8CI96 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip4Q8CI96 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.66■□□□□ 0.74
Clip4Q8CI96 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip4Q8CI96 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip4Q8CI96 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip4Q8CI96 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clip4Q8CI96 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clip4Q8CI96 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Clip4Q8CI96 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip4Q8CI96 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Clip4Q8CI96 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip4Q8CI96 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip4Q8CI96 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Clip4Q8CI96 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip4Q8CI96 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip4Q8CI96 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Clip4Q8CI96 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip4Q8CI96 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clip4Q8CI96 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Clip4Q8CI96 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.64■□□□□ 0.74
Clip4Q8CI96 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Clip4Q8CI96 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.64■□□□□ 0.74
Clip4Q8CI96 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clip4Q8CI96 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Clip4Q8CI96 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.64■□□□□ 0.73
Clip4Q8CI96 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Clip4Q8CI96 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clip4Q8CI96 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clip4Q8CI96 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clip4Q8CI96 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Clip4Q8CI96 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.63■□□□□ 0.73
Clip4Q8CI96 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.63■□□□□ 0.73
Clip4Q8CI96 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clip4Q8CI96 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip4Q8CI96 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clip4Q8CI96 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip4Q8CI96 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip4Q8CI96 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip4Q8CI96 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip4Q8CI96 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip4Q8CI96 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip4Q8CI96 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip4Q8CI96 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip4Q8CI96 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.62■□□□□ 0.73
Clip4Q8CI96 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.62■□□□□ 0.73
Clip4Q8CI96 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Clip4Q8CI96 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clip4Q8CI96 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.62■□□□□ 0.73
Clip4Q8CI96 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.62■□□□□ 0.73
Clip4Q8CI96 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.62■□□□□ 0.73
Clip4Q8CI96 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clip4Q8CI96 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip4Q8CI96 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.62■□□□□ 0.73
Clip4Q8CI96 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clip4Q8CI96 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Clip4Q8CI96 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip4Q8CI96 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clip4Q8CI96 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip4Q8CI96 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clip4Q8CI96 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.61■□□□□ 0.73
Clip4Q8CI96 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clip4Q8CI96 Gm45417-201ENSMUST00000209533 758 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 324.8 ms