Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sox30Q8CGW4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.62■■□□□ 1.05
Sox30Q8CGW4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Sox30Q8CGW4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox30Q8CGW4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox30Q8CGW4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox30Q8CGW4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.61■■□□□ 1.05
Sox30Q8CGW4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sox30Q8CGW4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox30Q8CGW4 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox30Q8CGW4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox30Q8CGW4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sox30Q8CGW4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
Sox30Q8CGW4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox30Q8CGW4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Sox30Q8CGW4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox30Q8CGW4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox30Q8CGW4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.6■■□□□ 1.05
Sox30Q8CGW4 Etf1-202ENSMUST00000180351 108 ntBASIC21.6■■□□□ 1.05
Sox30Q8CGW4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox30Q8CGW4 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox30Q8CGW4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sox30Q8CGW4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sox30Q8CGW4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Sox30Q8CGW4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sox30Q8CGW4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sox30Q8CGW4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.59■■□□□ 1.05
Sox30Q8CGW4 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.59■■□□□ 1.05
Sox30Q8CGW4 Gm18688-201ENSMUST00000204695 1859 ntBASIC21.59■■□□□ 1.05
Sox30Q8CGW4 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sox30Q8CGW4 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sox30Q8CGW4 BC021767-201ENSMUST00000126387 1716 ntBASIC21.58■■□□□ 1.05
Sox30Q8CGW4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sox30Q8CGW4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Sox30Q8CGW4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sox30Q8CGW4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sox30Q8CGW4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Sox30Q8CGW4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sox30Q8CGW4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sox30Q8CGW4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Sox30Q8CGW4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Sox30Q8CGW4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sox30Q8CGW4 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sox30Q8CGW4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sox30Q8CGW4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox30Q8CGW4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Sox30Q8CGW4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox30Q8CGW4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sox30Q8CGW4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sox30Q8CGW4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox30Q8CGW4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox30Q8CGW4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Sox30Q8CGW4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.56■■□□□ 1.04
Sox30Q8CGW4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox30Q8CGW4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sox30Q8CGW4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox30Q8CGW4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox30Q8CGW4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Sox30Q8CGW4 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox30Q8CGW4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox30Q8CGW4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox30Q8CGW4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sox30Q8CGW4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sox30Q8CGW4 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox30Q8CGW4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Sox30Q8CGW4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox30Q8CGW4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sox30Q8CGW4 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox30Q8CGW4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox30Q8CGW4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox30Q8CGW4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sox30Q8CGW4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox30Q8CGW4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox30Q8CGW4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox30Q8CGW4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox30Q8CGW4 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox30Q8CGW4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sox30Q8CGW4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sox30Q8CGW4 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sox30Q8CGW4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
Sox30Q8CGW4 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Sox30Q8CGW4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sox30Q8CGW4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Sox30Q8CGW4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sox30Q8CGW4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Sox30Q8CGW4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sox30Q8CGW4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sox30Q8CGW4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sox30Q8CGW4 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sox30Q8CGW4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sox30Q8CGW4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sox30Q8CGW4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.52■■□□□ 1.04
Sox30Q8CGW4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.52■■□□□ 1.04
Sox30Q8CGW4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sox30Q8CGW4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sox30Q8CGW4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sox30Q8CGW4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC21.52■■□□□ 1.04
Sox30Q8CGW4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sox30Q8CGW4 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Sox30Q8CGW4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms