Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h2aaQ8CGP4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h2aaQ8CGP4 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.46■□□□□ 0.55
Hist1h2aaQ8CGP4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Hist1h2aaQ8CGP4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h2aaQ8CGP4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Hist1h2aaQ8CGP4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Hist1h2aaQ8CGP4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hist1h2aaQ8CGP4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hist1h2aaQ8CGP4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hist1h2aaQ8CGP4 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.45■□□□□ 0.54
Hist1h2aaQ8CGP4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Hist1h2aaQ8CGP4 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hist1h2aaQ8CGP4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.45■□□□□ 0.54
Hist1h2aaQ8CGP4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.45■□□□□ 0.54
Hist1h2aaQ8CGP4 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Hist1h2aaQ8CGP4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hist1h2aaQ8CGP4 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Hist1h2aaQ8CGP4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Hist1h2aaQ8CGP4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.45■□□□□ 0.54
Hist1h2aaQ8CGP4 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Hist1h2aaQ8CGP4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hist1h2aaQ8CGP4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hist1h2aaQ8CGP4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hist1h2aaQ8CGP4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Hist1h2aaQ8CGP4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.44■□□□□ 0.54
Hist1h2aaQ8CGP4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.44■□□□□ 0.54
Hist1h2aaQ8CGP4 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Hist1h2aaQ8CGP4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hist1h2aaQ8CGP4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Hist1h2aaQ8CGP4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Hist1h2aaQ8CGP4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Hist1h2aaQ8CGP4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.44■□□□□ 0.54
Hist1h2aaQ8CGP4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hist1h2aaQ8CGP4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Hist1h2aaQ8CGP4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hist1h2aaQ8CGP4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.43■□□□□ 0.54
Hist1h2aaQ8CGP4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.43■□□□□ 0.54
Hist1h2aaQ8CGP4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
Hist1h2aaQ8CGP4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hist1h2aaQ8CGP4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hist1h2aaQ8CGP4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hist1h2aaQ8CGP4 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hist1h2aaQ8CGP4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hist1h2aaQ8CGP4 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hist1h2aaQ8CGP4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Hist1h2aaQ8CGP4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Hist1h2aaQ8CGP4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hist1h2aaQ8CGP4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Hist1h2aaQ8CGP4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hist1h2aaQ8CGP4 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.42■□□□□ 0.54
Hist1h2aaQ8CGP4 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.42■□□□□ 0.54
Hist1h2aaQ8CGP4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hist1h2aaQ8CGP4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hist1h2aaQ8CGP4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hist1h2aaQ8CGP4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hist1h2aaQ8CGP4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Hist1h2aaQ8CGP4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.42■□□□□ 0.54
Hist1h2aaQ8CGP4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hist1h2aaQ8CGP4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hist1h2aaQ8CGP4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hist1h2aaQ8CGP4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Hist1h2aaQ8CGP4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
Hist1h2aaQ8CGP4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Hist1h2aaQ8CGP4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hist1h2aaQ8CGP4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hist1h2aaQ8CGP4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hist1h2aaQ8CGP4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Hist1h2aaQ8CGP4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hist1h2aaQ8CGP4 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hist1h2aaQ8CGP4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Hist1h2aaQ8CGP4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hist1h2aaQ8CGP4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hist1h2aaQ8CGP4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.41■□□□□ 0.54
Hist1h2aaQ8CGP4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hist1h2aaQ8CGP4 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hist1h2aaQ8CGP4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hist1h2aaQ8CGP4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.4■□□□□ 0.54
Hist1h2aaQ8CGP4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hist1h2aaQ8CGP4 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.4■□□□□ 0.54
Hist1h2aaQ8CGP4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hist1h2aaQ8CGP4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.4■□□□□ 0.54
Hist1h2aaQ8CGP4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hist1h2aaQ8CGP4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Hist1h2aaQ8CGP4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h2aaQ8CGP4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h2aaQ8CGP4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Hist1h2aaQ8CGP4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Hist1h2aaQ8CGP4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h2aaQ8CGP4 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Hist1h2aaQ8CGP4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h2aaQ8CGP4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Hist1h2aaQ8CGP4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h2aaQ8CGP4 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.39■□□□□ 0.53
Hist1h2aaQ8CGP4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hist1h2aaQ8CGP4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hist1h2aaQ8CGP4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Hist1h2aaQ8CGP4 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hist1h2aaQ8CGP4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hist1h2aaQ8CGP4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms