Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rbm28Q8CGC6 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rbm28Q8CGC6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.2■■□□□ 1.3
Rbm28Q8CGC6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC23.2■■□□□ 1.3
Rbm28Q8CGC6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rbm28Q8CGC6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rbm28Q8CGC6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Rbm28Q8CGC6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rbm28Q8CGC6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rbm28Q8CGC6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rbm28Q8CGC6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rbm28Q8CGC6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rbm28Q8CGC6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rbm28Q8CGC6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rbm28Q8CGC6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rbm28Q8CGC6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rbm28Q8CGC6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Rbm28Q8CGC6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC23.18■■□□□ 1.3
Rbm28Q8CGC6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rbm28Q8CGC6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rbm28Q8CGC6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rbm28Q8CGC6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Rbm28Q8CGC6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rbm28Q8CGC6 Gm26571-201ENSMUST00000181399 666 ntBASIC23.17■■□□□ 1.3
Rbm28Q8CGC6 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.17■■□□□ 1.3
Rbm28Q8CGC6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rbm28Q8CGC6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rbm28Q8CGC6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rbm28Q8CGC6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.16■■□□□ 1.3
Rbm28Q8CGC6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rbm28Q8CGC6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Rbm28Q8CGC6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rbm28Q8CGC6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC23.16■■□□□ 1.3
Rbm28Q8CGC6 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rbm28Q8CGC6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rbm28Q8CGC6 Gm42642-201ENSMUST00000200683 355 ntBASIC23.16■■□□□ 1.3
Rbm28Q8CGC6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rbm28Q8CGC6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rbm28Q8CGC6 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rbm28Q8CGC6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
Rbm28Q8CGC6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC23.15■■□□□ 1.3
Rbm28Q8CGC6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rbm28Q8CGC6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rbm28Q8CGC6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rbm28Q8CGC6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rbm28Q8CGC6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rbm28Q8CGC6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rbm28Q8CGC6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rbm28Q8CGC6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rbm28Q8CGC6 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rbm28Q8CGC6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Rbm28Q8CGC6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rbm28Q8CGC6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rbm28Q8CGC6 Gm7291-201ENSMUST00000199147 382 ntBASIC23.14■■□□□ 1.29
Rbm28Q8CGC6 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rbm28Q8CGC6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rbm28Q8CGC6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rbm28Q8CGC6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rbm28Q8CGC6 Gm42569-201ENSMUST00000200539 472 ntBASIC23.13■■□□□ 1.29
Rbm28Q8CGC6 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC23.13■■□□□ 1.29
Rbm28Q8CGC6 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Rbm28Q8CGC6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rbm28Q8CGC6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rbm28Q8CGC6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.13■■□□□ 1.29
Rbm28Q8CGC6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rbm28Q8CGC6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.13■■□□□ 1.29
Rbm28Q8CGC6 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.12■■□□□ 1.29
Rbm28Q8CGC6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
Rbm28Q8CGC6 Gm10849-201ENSMUST00000100397 618 ntBASIC23.12■■□□□ 1.29
Rbm28Q8CGC6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rbm28Q8CGC6 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.12■■□□□ 1.29
Rbm28Q8CGC6 AC137127.1-201ENSMUST00000213466 1078 ntBASIC23.12■■□□□ 1.29
Rbm28Q8CGC6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rbm28Q8CGC6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rbm28Q8CGC6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rbm28Q8CGC6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rbm28Q8CGC6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.11■■□□□ 1.29
Rbm28Q8CGC6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rbm28Q8CGC6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC23.11■■□□□ 1.29
Rbm28Q8CGC6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rbm28Q8CGC6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rbm28Q8CGC6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
Rbm28Q8CGC6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rbm28Q8CGC6 Gm27405-201ENSMUST00000184201 112 ntBASIC23.1■■□□□ 1.29
Rbm28Q8CGC6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rbm28Q8CGC6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC23.1■■□□□ 1.29
Rbm28Q8CGC6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rbm28Q8CGC6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rbm28Q8CGC6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Rbm28Q8CGC6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Rbm28Q8CGC6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rbm28Q8CGC6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rbm28Q8CGC6 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Rbm28Q8CGC6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rbm28Q8CGC6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rbm28Q8CGC6 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rbm28Q8CGC6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rbm28Q8CGC6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Rbm28Q8CGC6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Rbm28Q8CGC6 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms