Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smc4Q8CG47 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC24.28■■□□□ 1.48
Smc4Q8CG47 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Smc4Q8CG47 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC24.28■■□□□ 1.48
Smc4Q8CG47 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smc4Q8CG47 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smc4Q8CG47 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Smc4Q8CG47 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC24.27■■□□□ 1.48
Smc4Q8CG47 Gm42778-201ENSMUST00000199644 553 ntBASIC24.27■■□□□ 1.48
Smc4Q8CG47 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Smc4Q8CG47 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Smc4Q8CG47 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Smc4Q8CG47 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Smc4Q8CG47 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC24.26■■□□□ 1.47
Smc4Q8CG47 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC24.26■■□□□ 1.47
Smc4Q8CG47 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Smc4Q8CG47 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC24.26■■□□□ 1.47
Smc4Q8CG47 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Smc4Q8CG47 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smc4Q8CG47 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smc4Q8CG47 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smc4Q8CG47 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smc4Q8CG47 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Smc4Q8CG47 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Smc4Q8CG47 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC24.24■■□□□ 1.47
Smc4Q8CG47 Gm14281-201ENSMUST00000121700 1294 ntBASIC24.24■■□□□ 1.47
Smc4Q8CG47 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Smc4Q8CG47 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC24.24■■□□□ 1.47
Smc4Q8CG47 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Smc4Q8CG47 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Smc4Q8CG47 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Smc4Q8CG47 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Smc4Q8CG47 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
Smc4Q8CG47 Cdkn3-203ENSMUST00000227149 1952 ntBASIC24.23■■□□□ 1.47
Smc4Q8CG47 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Smc4Q8CG47 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Smc4Q8CG47 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
Smc4Q8CG47 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Smc4Q8CG47 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Smc4Q8CG47 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
Smc4Q8CG47 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Smc4Q8CG47 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Smc4Q8CG47 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Smc4Q8CG47 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Smc4Q8CG47 Gm18671-201ENSMUST00000214826 683 ntBASIC24.22■■□□□ 1.47
Smc4Q8CG47 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Smc4Q8CG47 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Smc4Q8CG47 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Smc4Q8CG47 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC24.22■■□□□ 1.47
Smc4Q8CG47 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Smc4Q8CG47 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Smc4Q8CG47 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Smc4Q8CG47 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC24.21■■□□□ 1.47
Smc4Q8CG47 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Smc4Q8CG47 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Smc4Q8CG47 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Smc4Q8CG47 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC24.21■■□□□ 1.47
Smc4Q8CG47 Gm9988-201ENSMUST00000069786 435 ntBASIC24.21■■□□□ 1.47
Smc4Q8CG47 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Smc4Q8CG47 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Smc4Q8CG47 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC24.2■■□□□ 1.46
Smc4Q8CG47 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Smc4Q8CG47 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC24.2■■□□□ 1.46
Smc4Q8CG47 Gm42569-201ENSMUST00000200539 472 ntBASIC24.2■■□□□ 1.46
Smc4Q8CG47 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Smc4Q8CG47 AA386476-201ENSMUST00000098781 1665 ntBASIC24.2■■□□□ 1.46
Smc4Q8CG47 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Smc4Q8CG47 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Smc4Q8CG47 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Smc4Q8CG47 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Smc4Q8CG47 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Smc4Q8CG47 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Smc4Q8CG47 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Smc4Q8CG47 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Smc4Q8CG47 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Smc4Q8CG47 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Smc4Q8CG47 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC24.19■■□□□ 1.46
Smc4Q8CG47 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Smc4Q8CG47 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Smc4Q8CG47 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smc4Q8CG47 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Smc4Q8CG47 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC24.18■■□□□ 1.46
Smc4Q8CG47 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Smc4Q8CG47 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Smc4Q8CG47 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Smc4Q8CG47 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC24.17■■□□□ 1.46
Smc4Q8CG47 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Smc4Q8CG47 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Smc4Q8CG47 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC24.17■■□□□ 1.46
Smc4Q8CG47 AC154266.1-201ENSMUST00000223190 503 ntBASIC24.17■■□□□ 1.46
Smc4Q8CG47 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Smc4Q8CG47 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC24.16■■□□□ 1.46
Smc4Q8CG47 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Smc4Q8CG47 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Smc4Q8CG47 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC24.16■■□□□ 1.46
Smc4Q8CG47 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Smc4Q8CG47 Gm26571-201ENSMUST00000181399 666 ntBASIC24.16■■□□□ 1.46
Smc4Q8CG47 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Smc4Q8CG47 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Smc4Q8CG47 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms