Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.5■■□□□ 1.03
Prpf31Q8CCF0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.5■■□□□ 1.03
Prpf31Q8CCF0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf31Q8CCF0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.5■■□□□ 1.03
Prpf31Q8CCF0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf31Q8CCF0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
Prpf31Q8CCF0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.5■■□□□ 1.03
Prpf31Q8CCF0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Prpf31Q8CCF0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf31Q8CCF0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Prpf31Q8CCF0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf31Q8CCF0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf31Q8CCF0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf31Q8CCF0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
Prpf31Q8CCF0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.49■■□□□ 1.03
Prpf31Q8CCF0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf31Q8CCF0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf31Q8CCF0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf31Q8CCF0 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.49■■□□□ 1.03
Prpf31Q8CCF0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Prpf31Q8CCF0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Prpf31Q8CCF0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf31Q8CCF0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf31Q8CCF0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Prpf31Q8CCF0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf31Q8CCF0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf31Q8CCF0 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf31Q8CCF0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Prpf31Q8CCF0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Prpf31Q8CCF0 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf31Q8CCF0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.48■■□□□ 1.03
Prpf31Q8CCF0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf31Q8CCF0 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Prpf31Q8CCF0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf31Q8CCF0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.47■■□□□ 1.03
Prpf31Q8CCF0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf31Q8CCF0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf31Q8CCF0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf31Q8CCF0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Prpf31Q8CCF0 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Prpf31Q8CCF0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf31Q8CCF0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf31Q8CCF0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf31Q8CCF0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf31Q8CCF0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf31Q8CCF0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf31Q8CCF0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Prpf31Q8CCF0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.46■■□□□ 1.03
Prpf31Q8CCF0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf31Q8CCF0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf31Q8CCF0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
Prpf31Q8CCF0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf31Q8CCF0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf31Q8CCF0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf31Q8CCF0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Prpf31Q8CCF0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf31Q8CCF0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf31Q8CCF0 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Prpf31Q8CCF0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf31Q8CCF0 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.45■■□□□ 1.02
Prpf31Q8CCF0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf31Q8CCF0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf31Q8CCF0 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.45■■□□□ 1.02
Prpf31Q8CCF0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Prpf31Q8CCF0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Prpf31Q8CCF0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.45■■□□□ 1.02
Prpf31Q8CCF0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf31Q8CCF0 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf31Q8CCF0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf31Q8CCF0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Prpf31Q8CCF0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf31Q8CCF0 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Prpf31Q8CCF0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Prpf31Q8CCF0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf31Q8CCF0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf31Q8CCF0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Prpf31Q8CCF0 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.44■■□□□ 1.02
Prpf31Q8CCF0 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.44■■□□□ 1.02
Prpf31Q8CCF0 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.44■■□□□ 1.02
Prpf31Q8CCF0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.44■■□□□ 1.02
Prpf31Q8CCF0 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.44■■□□□ 1.02
Prpf31Q8CCF0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf31Q8CCF0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf31Q8CCF0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf31Q8CCF0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf31Q8CCF0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf31Q8CCF0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.44■■□□□ 1.02
Prpf31Q8CCF0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Prpf31Q8CCF0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf31Q8CCF0 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.43■■□□□ 1.02
Prpf31Q8CCF0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf31Q8CCF0 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf31Q8CCF0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf31Q8CCF0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf31Q8CCF0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Prpf31Q8CCF0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf31Q8CCF0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Prpf31Q8CCF0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.42■■□□□ 1.02
Prpf31Q8CCF0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.42■■□□□ 1.02
Prpf31Q8CCF0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms