Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uba3Q8C878 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Uba3Q8C878 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Uba3Q8C878 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Uba3Q8C878 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Uba3Q8C878 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Uba3Q8C878 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Uba3Q8C878 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.72■□□□□ 0.91
Uba3Q8C878 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Uba3Q8C878 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.72■□□□□ 0.91
Uba3Q8C878 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Uba3Q8C878 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Uba3Q8C878 Gm43173-201ENSMUST00000202246 593 ntBASIC20.72■□□□□ 0.91
Uba3Q8C878 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Uba3Q8C878 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.72■□□□□ 0.91
Uba3Q8C878 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Uba3Q8C878 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Uba3Q8C878 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Uba3Q8C878 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Uba3Q8C878 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Uba3Q8C878 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Uba3Q8C878 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Uba3Q8C878 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Uba3Q8C878 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Uba3Q8C878 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Uba3Q8C878 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.7■□□□□ 0.9
Uba3Q8C878 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Uba3Q8C878 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.7■□□□□ 0.9
Uba3Q8C878 Gm43017-201ENSMUST00000198296 752 ntBASIC20.7■□□□□ 0.9
Uba3Q8C878 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.7■□□□□ 0.9
Uba3Q8C878 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Uba3Q8C878 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Uba3Q8C878 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Uba3Q8C878 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Uba3Q8C878 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Uba3Q8C878 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.69■□□□□ 0.9
Uba3Q8C878 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Uba3Q8C878 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Uba3Q8C878 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Uba3Q8C878 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Uba3Q8C878 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Uba3Q8C878 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uba3Q8C878 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uba3Q8C878 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
Uba3Q8C878 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uba3Q8C878 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uba3Q8C878 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Uba3Q8C878 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uba3Q8C878 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Uba3Q8C878 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uba3Q8C878 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Uba3Q8C878 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uba3Q8C878 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.67■□□□□ 0.9
Uba3Q8C878 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uba3Q8C878 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Uba3Q8C878 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Uba3Q8C878 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.67■□□□□ 0.9
Uba3Q8C878 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Uba3Q8C878 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uba3Q8C878 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uba3Q8C878 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.67■□□□□ 0.9
Uba3Q8C878 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uba3Q8C878 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uba3Q8C878 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Uba3Q8C878 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uba3Q8C878 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uba3Q8C878 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uba3Q8C878 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uba3Q8C878 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Uba3Q8C878 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.66■□□□□ 0.9
Uba3Q8C878 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Uba3Q8C878 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.66■□□□□ 0.9
Uba3Q8C878 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uba3Q8C878 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uba3Q8C878 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Uba3Q8C878 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Uba3Q8C878 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Uba3Q8C878 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Uba3Q8C878 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Uba3Q8C878 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Uba3Q8C878 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.65■□□□□ 0.9
Uba3Q8C878 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Uba3Q8C878 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Uba3Q8C878 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.64■□□□□ 0.9
Uba3Q8C878 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Uba3Q8C878 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Uba3Q8C878 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Uba3Q8C878 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Uba3Q8C878 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Uba3Q8C878 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Uba3Q8C878 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Uba3Q8C878 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Uba3Q8C878 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Uba3Q8C878 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Uba3Q8C878 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Uba3Q8C878 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.63■□□□□ 0.89
Uba3Q8C878 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Uba3Q8C878 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.63■□□□□ 0.89
Uba3Q8C878 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.63■□□□□ 0.89
Uba3Q8C878 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms