Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 AA386476-201ENSMUST00000098781 1665 ntBASIC21.75■■□□□ 1.07
Trim9Q8C7M3 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.74■■□□□ 1.07
Trim9Q8C7M3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
Trim9Q8C7M3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trim9Q8C7M3 Gm43137-201ENSMUST00000198052 594 ntBASIC21.74■■□□□ 1.07
Trim9Q8C7M3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim9Q8C7M3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim9Q8C7M3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim9Q8C7M3 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.74■■□□□ 1.07
Trim9Q8C7M3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim9Q8C7M3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim9Q8C7M3 Gm20100-201ENSMUST00000209418 2272 ntBASIC21.73■■□□□ 1.07
Trim9Q8C7M3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim9Q8C7M3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim9Q8C7M3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim9Q8C7M3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.73■■□□□ 1.07
Trim9Q8C7M3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim9Q8C7M3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim9Q8C7M3 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.73■■□□□ 1.07
Trim9Q8C7M3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim9Q8C7M3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim9Q8C7M3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim9Q8C7M3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim9Q8C7M3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Trim9Q8C7M3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim9Q8C7M3 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim9Q8C7M3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
Trim9Q8C7M3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim9Q8C7M3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim9Q8C7M3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim9Q8C7M3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Trim9Q8C7M3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim9Q8C7M3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim9Q8C7M3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim9Q8C7M3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim9Q8C7M3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trim9Q8C7M3 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.71■■□□□ 1.07
Trim9Q8C7M3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Trim9Q8C7M3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim9Q8C7M3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim9Q8C7M3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Trim9Q8C7M3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.7■■□□□ 1.06
Trim9Q8C7M3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim9Q8C7M3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.7■■□□□ 1.06
Trim9Q8C7M3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Trim9Q8C7M3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim9Q8C7M3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim9Q8C7M3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim9Q8C7M3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.69■■□□□ 1.06
Trim9Q8C7M3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim9Q8C7M3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim9Q8C7M3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.69■■□□□ 1.06
Trim9Q8C7M3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim9Q8C7M3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.69■■□□□ 1.06
Trim9Q8C7M3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim9Q8C7M3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim9Q8C7M3 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trim9Q8C7M3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Trim9Q8C7M3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim9Q8C7M3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.69■■□□□ 1.06
Trim9Q8C7M3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trim9Q8C7M3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
Trim9Q8C7M3 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim9Q8C7M3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.68■■□□□ 1.06
Trim9Q8C7M3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.68■■□□□ 1.06
Trim9Q8C7M3 Spcs1-204ENSMUST00000226782 949 ntBASIC21.68■■□□□ 1.06
Trim9Q8C7M3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trim9Q8C7M3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim9Q8C7M3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim9Q8C7M3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim9Q8C7M3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim9Q8C7M3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim9Q8C7M3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim9Q8C7M3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim9Q8C7M3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.67■■□□□ 1.06
Trim9Q8C7M3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim9Q8C7M3 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim9Q8C7M3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Trim9Q8C7M3 Gm12251-201ENSMUST00000117893 792 ntBASIC21.67■■□□□ 1.06
Trim9Q8C7M3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Trim9Q8C7M3 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Trim9Q8C7M3 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trim9Q8C7M3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trim9Q8C7M3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Trim9Q8C7M3 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Trim9Q8C7M3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim9Q8C7M3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.65■■□□□ 1.06
Trim9Q8C7M3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim9Q8C7M3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Trim9Q8C7M3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trim9Q8C7M3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Trim9Q8C7M3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Trim9Q8C7M3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim9Q8C7M3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.64■■□□□ 1.05
Trim9Q8C7M3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim9Q8C7M3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Trim9Q8C7M3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim9Q8C7M3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Trim9Q8C7M3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Trim9Q8C7M3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms