Protein–RNA interactions for Protein: Q8C5N3

Cwc22, Pre-mRNA-splicing factor CWC22 homolog, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cwc22Q8C5N3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cwc22Q8C5N3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cwc22Q8C5N3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC27.2■■□□□ 1.95
Cwc22Q8C5N3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Cwc22Q8C5N3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Cwc22Q8C5N3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Cwc22Q8C5N3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC27.2■■□□□ 1.94
Cwc22Q8C5N3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Cwc22Q8C5N3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
Cwc22Q8C5N3 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Cwc22Q8C5N3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Cwc22Q8C5N3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cwc22Q8C5N3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cwc22Q8C5N3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC27.19■■□□□ 1.94
Cwc22Q8C5N3 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Cwc22Q8C5N3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC27.18■■□□□ 1.94
Cwc22Q8C5N3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Cwc22Q8C5N3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
Cwc22Q8C5N3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC27.18■■□□□ 1.94
Cwc22Q8C5N3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
Cwc22Q8C5N3 Gm10571-201ENSMUST00000097869 1638 ntBASIC27.18■■□□□ 1.94
Cwc22Q8C5N3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Cwc22Q8C5N3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Cwc22Q8C5N3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cwc22Q8C5N3 Gm26833-201ENSMUST00000180899 440 ntBASIC27.17■■□□□ 1.94
Cwc22Q8C5N3 Gm21168-201ENSMUST00000199646 1096 ntBASIC27.17■■□□□ 1.94
Cwc22Q8C5N3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC27.17■■□□□ 1.94
Cwc22Q8C5N3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC27.17■■□□□ 1.94
Cwc22Q8C5N3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cwc22Q8C5N3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cwc22Q8C5N3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC27.16■■□□□ 1.94
Cwc22Q8C5N3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC27.16■■□□□ 1.94
Cwc22Q8C5N3 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC27.16■■□□□ 1.94
Cwc22Q8C5N3 Gm2011-201ENSMUST00000203124 1263 ntBASIC27.16■■□□□ 1.94
Cwc22Q8C5N3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cwc22Q8C5N3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC27.15■■□□□ 1.94
Cwc22Q8C5N3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cwc22Q8C5N3 Gm11421-201ENSMUST00000122124 294 ntBASIC27.15■■□□□ 1.94
Cwc22Q8C5N3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Cwc22Q8C5N3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cwc22Q8C5N3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
Cwc22Q8C5N3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cwc22Q8C5N3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Cwc22Q8C5N3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC27.14■■□□□ 1.94
Cwc22Q8C5N3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cwc22Q8C5N3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC27.14■■□□□ 1.94
Cwc22Q8C5N3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
Cwc22Q8C5N3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC27.14■■□□□ 1.94
Cwc22Q8C5N3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC27.14■■□□□ 1.94
Cwc22Q8C5N3 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cwc22Q8C5N3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cwc22Q8C5N3 Gm42911-201ENSMUST00000199360 1630 ntBASIC27.14■■□□□ 1.94
Cwc22Q8C5N3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC27.14■■□□□ 1.94
Cwc22Q8C5N3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cwc22Q8C5N3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Cwc22Q8C5N3 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Cwc22Q8C5N3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cwc22Q8C5N3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Cwc22Q8C5N3 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cwc22Q8C5N3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
Cwc22Q8C5N3 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
Cwc22Q8C5N3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
Cwc22Q8C5N3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cwc22Q8C5N3 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cwc22Q8C5N3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Cwc22Q8C5N3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cwc22Q8C5N3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
Cwc22Q8C5N3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
Cwc22Q8C5N3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cwc22Q8C5N3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cwc22Q8C5N3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cwc22Q8C5N3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC27.11■■□□□ 1.93
Cwc22Q8C5N3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC27.11■■□□□ 1.93
Cwc22Q8C5N3 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC27.11■■□□□ 1.93
Cwc22Q8C5N3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC27.11■■□□□ 1.93
Cwc22Q8C5N3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cwc22Q8C5N3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
Cwc22Q8C5N3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cwc22Q8C5N3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cwc22Q8C5N3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cwc22Q8C5N3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
Cwc22Q8C5N3 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Cwc22Q8C5N3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
Cwc22Q8C5N3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Cwc22Q8C5N3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Cwc22Q8C5N3 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Cwc22Q8C5N3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Cwc22Q8C5N3 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Cwc22Q8C5N3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Cwc22Q8C5N3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cwc22Q8C5N3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cwc22Q8C5N3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Cwc22Q8C5N3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC27.09■■□□□ 1.93
Cwc22Q8C5N3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC27.08■■□□□ 1.93
Cwc22Q8C5N3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC27.08■■□□□ 1.93
Cwc22Q8C5N3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Cwc22Q8C5N3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Cwc22Q8C5N3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Cwc22Q8C5N3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Cwc22Q8C5N3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms