Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Ptcd1Q8C2E4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ptcd1Q8C2E4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ptcd1Q8C2E4 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ptcd1Q8C2E4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
Ptcd1Q8C2E4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Ptcd1Q8C2E4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
Ptcd1Q8C2E4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ptcd1Q8C2E4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC24.27■■□□□ 1.48
Ptcd1Q8C2E4 Gm20760-201ENSMUST00000179197 648 ntBASIC24.27■■□□□ 1.48
Ptcd1Q8C2E4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC24.27■■□□□ 1.48
Ptcd1Q8C2E4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ptcd1Q8C2E4 Gm4968-201ENSMUST00000071458 858 ntBASIC24.27■■□□□ 1.48
Ptcd1Q8C2E4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Ptcd1Q8C2E4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ptcd1Q8C2E4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC24.26■■□□□ 1.47
Ptcd1Q8C2E4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ptcd1Q8C2E4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ptcd1Q8C2E4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ptcd1Q8C2E4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ptcd1Q8C2E4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ptcd1Q8C2E4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC24.26■■□□□ 1.47
Ptcd1Q8C2E4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ptcd1Q8C2E4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ptcd1Q8C2E4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ptcd1Q8C2E4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC24.25■■□□□ 1.47
Ptcd1Q8C2E4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
Ptcd1Q8C2E4 Gm3807-201ENSMUST00000193520 1168 ntBASIC24.25■■□□□ 1.47
Ptcd1Q8C2E4 Gm42555-201ENSMUST00000199304 1039 ntBASIC24.25■■□□□ 1.47
Ptcd1Q8C2E4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ptcd1Q8C2E4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ptcd1Q8C2E4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ptcd1Q8C2E4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ptcd1Q8C2E4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Ptcd1Q8C2E4 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ptcd1Q8C2E4 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ptcd1Q8C2E4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Ptcd1Q8C2E4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ptcd1Q8C2E4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ptcd1Q8C2E4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ptcd1Q8C2E4 Gm27801-201ENSMUST00000184174 223 ntBASIC24.23■■□□□ 1.47
Ptcd1Q8C2E4 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ptcd1Q8C2E4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ptcd1Q8C2E4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ptcd1Q8C2E4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ptcd1Q8C2E4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC24.22■■□□□ 1.47
Ptcd1Q8C2E4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
Ptcd1Q8C2E4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ptcd1Q8C2E4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ptcd1Q8C2E4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Ptcd1Q8C2E4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC24.21■■□□□ 1.47
Ptcd1Q8C2E4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Ptcd1Q8C2E4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC24.21■■□□□ 1.47
Ptcd1Q8C2E4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ptcd1Q8C2E4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ptcd1Q8C2E4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC24.21■■□□□ 1.47
Ptcd1Q8C2E4 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ptcd1Q8C2E4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ptcd1Q8C2E4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC24.21■■□□□ 1.47
Ptcd1Q8C2E4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Ptcd1Q8C2E4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Ptcd1Q8C2E4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ptcd1Q8C2E4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ptcd1Q8C2E4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Ptcd1Q8C2E4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ptcd1Q8C2E4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ptcd1Q8C2E4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ptcd1Q8C2E4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Ptcd1Q8C2E4 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ptcd1Q8C2E4 Gm8520-201ENSMUST00000186517 868 ntBASIC24.19■■□□□ 1.46
Ptcd1Q8C2E4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ptcd1Q8C2E4 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ptcd1Q8C2E4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ptcd1Q8C2E4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ptcd1Q8C2E4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ptcd1Q8C2E4 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Ptcd1Q8C2E4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ptcd1Q8C2E4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ptcd1Q8C2E4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Ptcd1Q8C2E4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC24.18■■□□□ 1.46
Ptcd1Q8C2E4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ptcd1Q8C2E4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ptcd1Q8C2E4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ptcd1Q8C2E4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Ptcd1Q8C2E4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ptcd1Q8C2E4 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ptcd1Q8C2E4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC24.17■■□□□ 1.46
Ptcd1Q8C2E4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Ptcd1Q8C2E4 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ptcd1Q8C2E4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ptcd1Q8C2E4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ptcd1Q8C2E4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC24.16■■□□□ 1.46
Ptcd1Q8C2E4 Gm12527-201ENSMUST00000117967 564 ntBASIC24.16■■□□□ 1.46
Ptcd1Q8C2E4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ptcd1Q8C2E4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ptcd1Q8C2E4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Ptcd1Q8C2E4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC24.16■■□□□ 1.46
Ptcd1Q8C2E4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ptcd1Q8C2E4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ptcd1Q8C2E4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms