Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Cps1Q8C196 Gm8520-201ENSMUST00000186517 868 ntBASIC26.97■■□□□ 1.91
Cps1Q8C196 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Cps1Q8C196 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Cps1Q8C196 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Cps1Q8C196 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Cps1Q8C196 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Cps1Q8C196 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
Cps1Q8C196 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC26.96■■□□□ 1.91
Cps1Q8C196 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC26.95■■□□□ 1.91
Cps1Q8C196 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Cps1Q8C196 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Cps1Q8C196 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
Cps1Q8C196 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Cps1Q8C196 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC26.95■■□□□ 1.9
Cps1Q8C196 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Cps1Q8C196 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Cps1Q8C196 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
Cps1Q8C196 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Cps1Q8C196 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC26.94■■□□□ 1.9
Cps1Q8C196 Gm37856-201ENSMUST00000191634 999 ntBASIC26.94■■□□□ 1.9
Cps1Q8C196 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Cps1Q8C196 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Cps1Q8C196 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
Cps1Q8C196 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC26.93■■□□□ 1.9
Cps1Q8C196 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Cps1Q8C196 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
Cps1Q8C196 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC26.93■■□□□ 1.9
Cps1Q8C196 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
Cps1Q8C196 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC26.93■■□□□ 1.9
Cps1Q8C196 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Cps1Q8C196 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Cps1Q8C196 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Cps1Q8C196 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
Cps1Q8C196 AC154266.1-201ENSMUST00000223190 503 ntBASIC26.92■■□□□ 1.9
Cps1Q8C196 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Cps1Q8C196 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
Cps1Q8C196 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Cps1Q8C196 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Cps1Q8C196 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Cps1Q8C196 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Cps1Q8C196 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC26.91■■□□□ 1.9
Cps1Q8C196 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
Cps1Q8C196 Gm13168-201ENSMUST00000121771 632 ntBASIC26.91■■□□□ 1.9
Cps1Q8C196 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
Cps1Q8C196 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Cps1Q8C196 Gm6365-201ENSMUST00000054711 744 ntBASIC26.91■■□□□ 1.9
Cps1Q8C196 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
Cps1Q8C196 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Cps1Q8C196 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Cps1Q8C196 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC26.9■■□□□ 1.9
Cps1Q8C196 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cps1Q8C196 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cps1Q8C196 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cps1Q8C196 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cps1Q8C196 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Cps1Q8C196 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Cps1Q8C196 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC26.9■■□□□ 1.9
Cps1Q8C196 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC26.9■■□□□ 1.9
Cps1Q8C196 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
Cps1Q8C196 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC26.89■■□□□ 1.9
Cps1Q8C196 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Cps1Q8C196 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.89
Cps1Q8C196 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC26.89■■□□□ 1.89
Cps1Q8C196 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Cps1Q8C196 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Cps1Q8C196 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Cps1Q8C196 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Cps1Q8C196 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Cps1Q8C196 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Cps1Q8C196 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Cps1Q8C196 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Cps1Q8C196 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cps1Q8C196 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cps1Q8C196 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Cps1Q8C196 AC135637.1-201ENSMUST00000227750 365 ntBASIC26.87■■□□□ 1.89
Cps1Q8C196 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cps1Q8C196 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
Cps1Q8C196 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cps1Q8C196 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC26.86■■□□□ 1.89
Cps1Q8C196 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cps1Q8C196 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC26.86■■□□□ 1.89
Cps1Q8C196 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Cps1Q8C196 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC26.86■■□□□ 1.89
Cps1Q8C196 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cps1Q8C196 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cps1Q8C196 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
Cps1Q8C196 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cps1Q8C196 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Cps1Q8C196 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Cps1Q8C196 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC26.85■■□□□ 1.89
Cps1Q8C196 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Cps1Q8C196 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Cps1Q8C196 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
Cps1Q8C196 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Cps1Q8C196 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Cps1Q8C196 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
Cps1Q8C196 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Cps1Q8C196 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
Cps1Q8C196 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms