Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Vps9d1Q8C190 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps9d1Q8C190 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps9d1Q8C190 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps9d1Q8C190 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.3■□□□□ 0.52
Vps9d1Q8C190 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps9d1Q8C190 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps9d1Q8C190 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps9d1Q8C190 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps9d1Q8C190 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps9d1Q8C190 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps9d1Q8C190 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps9d1Q8C190 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vps9d1Q8C190 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vps9d1Q8C190 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.29■□□□□ 0.52
Vps9d1Q8C190 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps9d1Q8C190 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.29■□□□□ 0.52
Vps9d1Q8C190 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps9d1Q8C190 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps9d1Q8C190 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps9d1Q8C190 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps9d1Q8C190 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps9d1Q8C190 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps9d1Q8C190 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vps9d1Q8C190 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.28■□□□□ 0.52
Vps9d1Q8C190 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps9d1Q8C190 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps9d1Q8C190 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps9d1Q8C190 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps9d1Q8C190 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps9d1Q8C190 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps9d1Q8C190 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Vps9d1Q8C190 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vps9d1Q8C190 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps9d1Q8C190 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vps9d1Q8C190 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.27■□□□□ 0.52
Vps9d1Q8C190 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps9d1Q8C190 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vps9d1Q8C190 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.27■□□□□ 0.52
Vps9d1Q8C190 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.27■□□□□ 0.52
Vps9d1Q8C190 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Vps9d1Q8C190 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps9d1Q8C190 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps9d1Q8C190 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps9d1Q8C190 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vps9d1Q8C190 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Vps9d1Q8C190 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps9d1Q8C190 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps9d1Q8C190 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps9d1Q8C190 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps9d1Q8C190 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps9d1Q8C190 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps9d1Q8C190 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Vps9d1Q8C190 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps9d1Q8C190 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps9d1Q8C190 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps9d1Q8C190 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps9d1Q8C190 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps9d1Q8C190 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps9d1Q8C190 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps9d1Q8C190 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.25■□□□□ 0.51
Vps9d1Q8C190 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.25■□□□□ 0.51
Vps9d1Q8C190 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps9d1Q8C190 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps9d1Q8C190 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps9d1Q8C190 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps9d1Q8C190 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Vps9d1Q8C190 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Vps9d1Q8C190 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Vps9d1Q8C190 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.24■□□□□ 0.51
Vps9d1Q8C190 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps9d1Q8C190 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Vps9d1Q8C190 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps9d1Q8C190 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Vps9d1Q8C190 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Vps9d1Q8C190 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps9d1Q8C190 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps9d1Q8C190 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Vps9d1Q8C190 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps9d1Q8C190 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps9d1Q8C190 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vps9d1Q8C190 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Vps9d1Q8C190 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.23■□□□□ 0.51
Vps9d1Q8C190 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms