Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Usp47Q8BY87 AC154266.1-201ENSMUST00000223190 503 ntBASIC27.99■■■□□ 2.07
Usp47Q8BY87 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Usp47Q8BY87 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Usp47Q8BY87 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Usp47Q8BY87 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Usp47Q8BY87 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
Usp47Q8BY87 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC27.98■■■□□ 2.07
Usp47Q8BY87 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC27.98■■■□□ 2.07
Usp47Q8BY87 Gm26571-201ENSMUST00000181399 666 ntBASIC27.98■■■□□ 2.07
Usp47Q8BY87 Gm5297-201ENSMUST00000198555 1171 ntBASIC27.98■■■□□ 2.07
Usp47Q8BY87 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC27.98■■■□□ 2.07
Usp47Q8BY87 CT030146.1-201ENSMUST00000220919 217 ntBASIC27.98■■■□□ 2.07
Usp47Q8BY87 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Usp47Q8BY87 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Usp47Q8BY87 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Usp47Q8BY87 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Usp47Q8BY87 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Usp47Q8BY87 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Usp47Q8BY87 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC27.96■■■□□ 2.07
Usp47Q8BY87 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC27.96■■■□□ 2.07
Usp47Q8BY87 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Usp47Q8BY87 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC27.95■■■□□ 2.06
Usp47Q8BY87 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Usp47Q8BY87 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
Usp47Q8BY87 Gm10849-201ENSMUST00000100397 618 ntBASIC27.94■■■□□ 2.06
Usp47Q8BY87 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC27.94■■■□□ 2.06
Usp47Q8BY87 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Usp47Q8BY87 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Usp47Q8BY87 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Usp47Q8BY87 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Usp47Q8BY87 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Usp47Q8BY87 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
Usp47Q8BY87 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC27.93■■■□□ 2.06
Usp47Q8BY87 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Usp47Q8BY87 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
Usp47Q8BY87 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC27.93■■■□□ 2.06
Usp47Q8BY87 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Usp47Q8BY87 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC27.92■■■□□ 2.06
Usp47Q8BY87 Gm10033-202ENSMUST00000211874 928 ntBASIC27.92■■■□□ 2.06
Usp47Q8BY87 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC27.92■■■□□ 2.06
Usp47Q8BY87 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Usp47Q8BY87 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Usp47Q8BY87 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
Usp47Q8BY87 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC27.91■■■□□ 2.06
Usp47Q8BY87 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Usp47Q8BY87 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC27.91■■■□□ 2.06
Usp47Q8BY87 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC27.91■■■□□ 2.06
Usp47Q8BY87 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC27.91■■■□□ 2.06
Usp47Q8BY87 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC27.91■■■□□ 2.06
Usp47Q8BY87 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Usp47Q8BY87 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC27.9■■■□□ 2.06
Usp47Q8BY87 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.06
Usp47Q8BY87 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.06
Usp47Q8BY87 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Usp47Q8BY87 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Usp47Q8BY87 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Usp47Q8BY87 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC27.89■■■□□ 2.06
Usp47Q8BY87 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC27.89■■■□□ 2.06
Usp47Q8BY87 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC27.89■■■□□ 2.06
Usp47Q8BY87 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Usp47Q8BY87 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.06
Usp47Q8BY87 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC27.89■■■□□ 2.06
Usp47Q8BY87 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC27.89■■■□□ 2.06
Usp47Q8BY87 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Usp47Q8BY87 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Usp47Q8BY87 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Usp47Q8BY87 Slc35b2-207ENSMUST00000226086 850 ntBASIC27.88■■■□□ 2.05
Usp47Q8BY87 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Usp47Q8BY87 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC27.88■■■□□ 2.05
Usp47Q8BY87 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Usp47Q8BY87 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC27.87■■■□□ 2.05
Usp47Q8BY87 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Usp47Q8BY87 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Usp47Q8BY87 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Usp47Q8BY87 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC27.87■■■□□ 2.05
Usp47Q8BY87 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
Usp47Q8BY87 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Usp47Q8BY87 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
Usp47Q8BY87 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Usp47Q8BY87 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Usp47Q8BY87 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC27.87■■■□□ 2.05
Usp47Q8BY87 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Usp47Q8BY87 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Usp47Q8BY87 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Usp47Q8BY87 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Usp47Q8BY87 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
Usp47Q8BY87 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC27.86■■■□□ 2.05
Usp47Q8BY87 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Usp47Q8BY87 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Usp47Q8BY87 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Usp47Q8BY87 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Usp47Q8BY87 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
Usp47Q8BY87 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Usp47Q8BY87 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Usp47Q8BY87 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
Usp47Q8BY87 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Usp47Q8BY87 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC27.85■■■□□ 2.05
Usp47Q8BY87 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC27.85■■■□□ 2.05
Usp47Q8BY87 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms