Protein–RNA interactions for Protein: Q8BXS2

Tnfsfm13, Tumor necrosis factor (ligand) superfamily, membrane-bound member 13, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsfm13Q8BXS2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsfm13Q8BXS2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsfm13Q8BXS2 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsfm13Q8BXS2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsfm13Q8BXS2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsfm13Q8BXS2 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsfm13Q8BXS2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Tnfsfm13Q8BXS2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsfm13Q8BXS2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsfm13Q8BXS2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Tnfsfm13Q8BXS2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Tnfsfm13Q8BXS2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsfm13Q8BXS2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsfm13Q8BXS2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsfm13Q8BXS2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.45■□□□□ 0.38
Tnfsfm13Q8BXS2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsfm13Q8BXS2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsfm13Q8BXS2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Tnfsfm13Q8BXS2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsfm13Q8BXS2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsfm13Q8BXS2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsfm13Q8BXS2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsfm13Q8BXS2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsfm13Q8BXS2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsfm13Q8BXS2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsfm13Q8BXS2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsfm13Q8BXS2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsfm13Q8BXS2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsfm13Q8BXS2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsfm13Q8BXS2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfsfm13Q8BXS2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Tnfsfm13Q8BXS2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.43■□□□□ 0.38
Tnfsfm13Q8BXS2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfsfm13Q8BXS2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Tnfsfm13Q8BXS2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfsfm13Q8BXS2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.43■□□□□ 0.38
Tnfsfm13Q8BXS2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
Tnfsfm13Q8BXS2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Tnfsfm13Q8BXS2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Tnfsfm13Q8BXS2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfsfm13Q8BXS2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfsfm13Q8BXS2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfsfm13Q8BXS2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfsfm13Q8BXS2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfsfm13Q8BXS2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Tnfsfm13Q8BXS2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfsfm13Q8BXS2 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfsfm13Q8BXS2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfsfm13Q8BXS2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
Tnfsfm13Q8BXS2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Tnfsfm13Q8BXS2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfsfm13Q8BXS2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfsfm13Q8BXS2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Tnfsfm13Q8BXS2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Tnfsfm13Q8BXS2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfsfm13Q8BXS2 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Tnfsfm13Q8BXS2 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsfm13Q8BXS2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsfm13Q8BXS2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Tnfsfm13Q8BXS2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsfm13Q8BXS2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.41■□□□□ 0.38
Tnfsfm13Q8BXS2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Tnfsfm13Q8BXS2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsfm13Q8BXS2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsfm13Q8BXS2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsfm13Q8BXS2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsfm13Q8BXS2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsfm13Q8BXS2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsfm13Q8BXS2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Tnfsfm13Q8BXS2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Tnfsfm13Q8BXS2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Tnfsfm13Q8BXS2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsfm13Q8BXS2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Tnfsfm13Q8BXS2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsfm13Q8BXS2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsfm13Q8BXS2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.4■□□□□ 0.38
Tnfsfm13Q8BXS2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsfm13Q8BXS2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.4■□□□□ 0.38
Tnfsfm13Q8BXS2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsfm13Q8BXS2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Tnfsfm13Q8BXS2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tnfsfm13Q8BXS2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Tnfsfm13Q8BXS2 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfsfm13Q8BXS2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfsfm13Q8BXS2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.39■□□□□ 0.37
Tnfsfm13Q8BXS2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfsfm13Q8BXS2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.39■□□□□ 0.37
Tnfsfm13Q8BXS2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.39■□□□□ 0.37
Tnfsfm13Q8BXS2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.39■□□□□ 0.37
Tnfsfm13Q8BXS2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Tnfsfm13Q8BXS2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Tnfsfm13Q8BXS2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfsfm13Q8BXS2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfsfm13Q8BXS2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfsfm13Q8BXS2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Tnfsfm13Q8BXS2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.39■□□□□ 0.37
Tnfsfm13Q8BXS2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.39■□□□□ 0.37
Tnfsfm13Q8BXS2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfsfm13Q8BXS2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Tnfsfm13Q8BXS2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms