Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SprnQ8BWU1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.39■□□□□ 0.37
SprnQ8BWU1 Gm10232-201ENSMUST00000089221 720 ntBASIC17.39■□□□□ 0.37
SprnQ8BWU1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SprnQ8BWU1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SprnQ8BWU1 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SprnQ8BWU1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SprnQ8BWU1 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.38■□□□□ 0.37
SprnQ8BWU1 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SprnQ8BWU1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
SprnQ8BWU1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SprnQ8BWU1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SprnQ8BWU1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SprnQ8BWU1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SprnQ8BWU1 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SprnQ8BWU1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SprnQ8BWU1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.38■□□□□ 0.37
SprnQ8BWU1 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.38■□□□□ 0.37
SprnQ8BWU1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SprnQ8BWU1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
SprnQ8BWU1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.38■□□□□ 0.37
SprnQ8BWU1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SprnQ8BWU1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SprnQ8BWU1 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
SprnQ8BWU1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SprnQ8BWU1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SprnQ8BWU1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SprnQ8BWU1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SprnQ8BWU1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SprnQ8BWU1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SprnQ8BWU1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SprnQ8BWU1 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SprnQ8BWU1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SprnQ8BWU1 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SprnQ8BWU1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SprnQ8BWU1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SprnQ8BWU1 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.36■□□□□ 0.37
SprnQ8BWU1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SprnQ8BWU1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SprnQ8BWU1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.36■□□□□ 0.37
SprnQ8BWU1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SprnQ8BWU1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SprnQ8BWU1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SprnQ8BWU1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SprnQ8BWU1 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.36■□□□□ 0.37
SprnQ8BWU1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SprnQ8BWU1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SprnQ8BWU1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.36■□□□□ 0.37
SprnQ8BWU1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.35■□□□□ 0.37
SprnQ8BWU1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SprnQ8BWU1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.35■□□□□ 0.37
SprnQ8BWU1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SprnQ8BWU1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SprnQ8BWU1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
SprnQ8BWU1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SprnQ8BWU1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SprnQ8BWU1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SprnQ8BWU1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SprnQ8BWU1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SprnQ8BWU1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SprnQ8BWU1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SprnQ8BWU1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SprnQ8BWU1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SprnQ8BWU1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SprnQ8BWU1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SprnQ8BWU1 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SprnQ8BWU1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SprnQ8BWU1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SprnQ8BWU1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SprnQ8BWU1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SprnQ8BWU1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SprnQ8BWU1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SprnQ8BWU1 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SprnQ8BWU1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SprnQ8BWU1 Rarb-207ENSMUST00000225921 2756 ntBASIC17.34■□□□□ 0.37
SprnQ8BWU1 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SprnQ8BWU1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SprnQ8BWU1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SprnQ8BWU1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SprnQ8BWU1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SprnQ8BWU1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SprnQ8BWU1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SprnQ8BWU1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SprnQ8BWU1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SprnQ8BWU1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SprnQ8BWU1 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SprnQ8BWU1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SprnQ8BWU1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SprnQ8BWU1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SprnQ8BWU1 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
SprnQ8BWU1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.32■□□□□ 0.36
SprnQ8BWU1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.32■□□□□ 0.36
SprnQ8BWU1 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SprnQ8BWU1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.32■□□□□ 0.36
SprnQ8BWU1 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SprnQ8BWU1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.32■□□□□ 0.36
SprnQ8BWU1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SprnQ8BWU1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.32■□□□□ 0.36
SprnQ8BWU1 Etf1-202ENSMUST00000180351 108 ntBASIC17.32■□□□□ 0.36
SprnQ8BWU1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms