Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdk5rap1Q8BTW8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap1Q8BTW8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap1Q8BTW8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap1Q8BTW8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap1Q8BTW8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap1Q8BTW8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap1Q8BTW8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap1Q8BTW8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap1Q8BTW8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap1Q8BTW8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.65■□□□□ 0.58
Cdk5rap1Q8BTW8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap1Q8BTW8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap1Q8BTW8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap1Q8BTW8 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap1Q8BTW8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap1Q8BTW8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap1Q8BTW8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap1Q8BTW8 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdk5rap1Q8BTW8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cdk5rap1Q8BTW8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Cdk5rap1Q8BTW8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdk5rap1Q8BTW8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Cdk5rap1Q8BTW8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdk5rap1Q8BTW8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdk5rap1Q8BTW8 Gm27801-201ENSMUST00000184174 223 ntBASIC18.64■□□□□ 0.57
Cdk5rap1Q8BTW8 Gm42642-201ENSMUST00000200683 355 ntBASIC18.64■□□□□ 0.57
Cdk5rap1Q8BTW8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdk5rap1Q8BTW8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdk5rap1Q8BTW8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk5rap1Q8BTW8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk5rap1Q8BTW8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.63■□□□□ 0.57
Cdk5rap1Q8BTW8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk5rap1Q8BTW8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.63■□□□□ 0.57
Cdk5rap1Q8BTW8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cdk5rap1Q8BTW8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk5rap1Q8BTW8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.63■□□□□ 0.57
Cdk5rap1Q8BTW8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdk5rap1Q8BTW8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.63■□□□□ 0.57
Cdk5rap1Q8BTW8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cdk5rap1Q8BTW8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk5rap1Q8BTW8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk5rap1Q8BTW8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.62■□□□□ 0.57
Cdk5rap1Q8BTW8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk5rap1Q8BTW8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk5rap1Q8BTW8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk5rap1Q8BTW8 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.62■□□□□ 0.57
Cdk5rap1Q8BTW8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Cdk5rap1Q8BTW8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdk5rap1Q8BTW8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk5rap1Q8BTW8 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.61■□□□□ 0.57
Cdk5rap1Q8BTW8 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.61■□□□□ 0.57
Cdk5rap1Q8BTW8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk5rap1Q8BTW8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.61■□□□□ 0.57
Cdk5rap1Q8BTW8 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.61■□□□□ 0.57
Cdk5rap1Q8BTW8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.61■□□□□ 0.57
Cdk5rap1Q8BTW8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.61■□□□□ 0.57
Cdk5rap1Q8BTW8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk5rap1Q8BTW8 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk5rap1Q8BTW8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdk5rap1Q8BTW8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk5rap1Q8BTW8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk5rap1Q8BTW8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cdk5rap1Q8BTW8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk5rap1Q8BTW8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk5rap1Q8BTW8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk5rap1Q8BTW8 Gm18671-201ENSMUST00000214826 683 ntBASIC18.6■□□□□ 0.57
Cdk5rap1Q8BTW8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk5rap1Q8BTW8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk5rap1Q8BTW8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdk5rap1Q8BTW8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cdk5rap1Q8BTW8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk5rap1Q8BTW8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk5rap1Q8BTW8 Gm42778-201ENSMUST00000199644 553 ntBASIC18.59■□□□□ 0.57
Cdk5rap1Q8BTW8 Gm42569-201ENSMUST00000200539 472 ntBASIC18.59■□□□□ 0.57
Cdk5rap1Q8BTW8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk5rap1Q8BTW8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk5rap1Q8BTW8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.59■□□□□ 0.57
Cdk5rap1Q8BTW8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdk5rap1Q8BTW8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdk5rap1Q8BTW8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdk5rap1Q8BTW8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdk5rap1Q8BTW8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cdk5rap1Q8BTW8 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdk5rap1Q8BTW8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cdk5rap1Q8BTW8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cdk5rap1Q8BTW8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdk5rap1Q8BTW8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdk5rap1Q8BTW8 Gm10849-201ENSMUST00000100397 618 ntBASIC18.57■□□□□ 0.56
Cdk5rap1Q8BTW8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Cdk5rap1Q8BTW8 Gm26571-201ENSMUST00000181399 666 ntBASIC18.57■□□□□ 0.56
Cdk5rap1Q8BTW8 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.57■□□□□ 0.56
Cdk5rap1Q8BTW8 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.57■□□□□ 0.56
Cdk5rap1Q8BTW8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdk5rap1Q8BTW8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cdk5rap1Q8BTW8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdk5rap1Q8BTW8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
Cdk5rap1Q8BTW8 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdk5rap1Q8BTW8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.56■□□□□ 0.56
Cdk5rap1Q8BTW8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms