Protein–RNA interactions for Protein: Q8BTF7

Lig4, DNA ligase 4, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4Q8BTF7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.81■□□□□ 0.92
Lig4Q8BTF7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.81■□□□□ 0.92
Lig4Q8BTF7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lig4Q8BTF7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Lig4Q8BTF7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lig4Q8BTF7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Lig4Q8BTF7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.81■□□□□ 0.92
Lig4Q8BTF7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Lig4Q8BTF7 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Lig4Q8BTF7 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig4Q8BTF7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lig4Q8BTF7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Lig4Q8BTF7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig4Q8BTF7 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig4Q8BTF7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig4Q8BTF7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Lig4Q8BTF7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lig4Q8BTF7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lig4Q8BTF7 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.79■□□□□ 0.92
Lig4Q8BTF7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lig4Q8BTF7 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lig4Q8BTF7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.79■□□□□ 0.92
Lig4Q8BTF7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.79■□□□□ 0.92
Lig4Q8BTF7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lig4Q8BTF7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Lig4Q8BTF7 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Lig4Q8BTF7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lig4Q8BTF7 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.78■□□□□ 0.92
Lig4Q8BTF7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Lig4Q8BTF7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.78■□□□□ 0.92
Lig4Q8BTF7 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.78■□□□□ 0.92
Lig4Q8BTF7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lig4Q8BTF7 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Lig4Q8BTF7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lig4Q8BTF7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lig4Q8BTF7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lig4Q8BTF7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lig4Q8BTF7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.77■□□□□ 0.92
Lig4Q8BTF7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Lig4Q8BTF7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Lig4Q8BTF7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.77■□□□□ 0.92
Lig4Q8BTF7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lig4Q8BTF7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Lig4Q8BTF7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lig4Q8BTF7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Lig4Q8BTF7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lig4Q8BTF7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.76■□□□□ 0.91
Lig4Q8BTF7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.76■□□□□ 0.91
Lig4Q8BTF7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.76■□□□□ 0.91
Lig4Q8BTF7 Gm18284-201ENSMUST00000172604 624 ntBASIC20.76■□□□□ 0.91
Lig4Q8BTF7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.76■□□□□ 0.91
Lig4Q8BTF7 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Lig4Q8BTF7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lig4Q8BTF7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Lig4Q8BTF7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lig4Q8BTF7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lig4Q8BTF7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lig4Q8BTF7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lig4Q8BTF7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lig4Q8BTF7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lig4Q8BTF7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lig4Q8BTF7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lig4Q8BTF7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lig4Q8BTF7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lig4Q8BTF7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.75■□□□□ 0.91
Lig4Q8BTF7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lig4Q8BTF7 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lig4Q8BTF7 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lig4Q8BTF7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lig4Q8BTF7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lig4Q8BTF7 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lig4Q8BTF7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lig4Q8BTF7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lig4Q8BTF7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lig4Q8BTF7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Lig4Q8BTF7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lig4Q8BTF7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lig4Q8BTF7 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Lig4Q8BTF7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lig4Q8BTF7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Lig4Q8BTF7 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Lig4Q8BTF7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.74■□□□□ 0.91
Lig4Q8BTF7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lig4Q8BTF7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lig4Q8BTF7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lig4Q8BTF7 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lig4Q8BTF7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.73■□□□□ 0.91
Lig4Q8BTF7 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Lig4Q8BTF7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lig4Q8BTF7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lig4Q8BTF7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Lig4Q8BTF7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lig4Q8BTF7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lig4Q8BTF7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Lig4Q8BTF7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lig4Q8BTF7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.72■□□□□ 0.91
Lig4Q8BTF7 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.72■□□□□ 0.91
Lig4Q8BTF7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lig4Q8BTF7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lig4Q8BTF7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms