Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Nhlrc1Q8BR37 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nhlrc1Q8BR37 Gm42569-201ENSMUST00000200539 472 ntBASIC15.18■□□□□ 0.02
Nhlrc1Q8BR37 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.18■□□□□ 0.02
Nhlrc1Q8BR37 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Nhlrc1Q8BR37 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.18■□□□□ 0.02
Nhlrc1Q8BR37 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Nhlrc1Q8BR37 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nhlrc1Q8BR37 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nhlrc1Q8BR37 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.18■□□□□ 0.02
Nhlrc1Q8BR37 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Nhlrc1Q8BR37 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Nhlrc1Q8BR37 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhlrc1Q8BR37 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhlrc1Q8BR37 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhlrc1Q8BR37 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhlrc1Q8BR37 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhlrc1Q8BR37 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhlrc1Q8BR37 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC15.17■□□□□ 0.02
Nhlrc1Q8BR37 Gm10849-201ENSMUST00000100397 618 ntBASIC15.17■□□□□ 0.02
Nhlrc1Q8BR37 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.17■□□□□ 0.02
Nhlrc1Q8BR37 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhlrc1Q8BR37 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Nhlrc1Q8BR37 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Nhlrc1Q8BR37 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhlrc1Q8BR37 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhlrc1Q8BR37 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhlrc1Q8BR37 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Nhlrc1Q8BR37 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhlrc1Q8BR37 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhlrc1Q8BR37 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Nhlrc1Q8BR37 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhlrc1Q8BR37 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhlrc1Q8BR37 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Nhlrc1Q8BR37 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nhlrc1Q8BR37 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Nhlrc1Q8BR37 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhlrc1Q8BR37 Gm18671-201ENSMUST00000214826 683 ntBASIC15.16■□□□□ 0.02
Nhlrc1Q8BR37 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhlrc1Q8BR37 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhlrc1Q8BR37 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhlrc1Q8BR37 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhlrc1Q8BR37 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Nhlrc1Q8BR37 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.16■□□□□ 0.02
Nhlrc1Q8BR37 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhlrc1Q8BR37 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhlrc1Q8BR37 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC15.15■□□□□ 0.02
Nhlrc1Q8BR37 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC15.15■□□□□ 0.02
Nhlrc1Q8BR37 Gm42778-201ENSMUST00000199644 553 ntBASIC15.15■□□□□ 0.02
Nhlrc1Q8BR37 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.15■□□□□ 0.02
Nhlrc1Q8BR37 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.15■□□□□ 0.02
Nhlrc1Q8BR37 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhlrc1Q8BR37 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhlrc1Q8BR37 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Nhlrc1Q8BR37 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhlrc1Q8BR37 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Nhlrc1Q8BR37 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.14■□□□□ 0.01
Nhlrc1Q8BR37 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nhlrc1Q8BR37 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nhlrc1Q8BR37 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Nhlrc1Q8BR37 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Nhlrc1Q8BR37 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Nhlrc1Q8BR37 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.14■□□□□ 0.01
Nhlrc1Q8BR37 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Nhlrc1Q8BR37 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nhlrc1Q8BR37 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nhlrc1Q8BR37 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nhlrc1Q8BR37 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.13■□□□□ 0.01
Nhlrc1Q8BR37 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nhlrc1Q8BR37 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC15.13■□□□□ 0.01
Nhlrc1Q8BR37 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nhlrc1Q8BR37 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nhlrc1Q8BR37 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nhlrc1Q8BR37 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nhlrc1Q8BR37 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nhlrc1Q8BR37 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nhlrc1Q8BR37 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Nhlrc1Q8BR37 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nhlrc1Q8BR37 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nhlrc1Q8BR37 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhlrc1Q8BR37 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhlrc1Q8BR37 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhlrc1Q8BR37 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.12■□□□□ 0.01
Nhlrc1Q8BR37 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nhlrc1Q8BR37 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nhlrc1Q8BR37 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhlrc1Q8BR37 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.12■□□□□ 0.01
Nhlrc1Q8BR37 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Nhlrc1Q8BR37 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.12■□□□□ 0.01
Nhlrc1Q8BR37 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nhlrc1Q8BR37 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nhlrc1Q8BR37 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
Nhlrc1Q8BR37 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Nhlrc1Q8BR37 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nhlrc1Q8BR37 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nhlrc1Q8BR37 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nhlrc1Q8BR37 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.11■□□□□ 0.01
Nhlrc1Q8BR37 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Nhlrc1Q8BR37 Gm26571-201ENSMUST00000181399 666 ntBASIC15.11■□□□□ 0.01
Nhlrc1Q8BR37 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms