Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh20Q8BIZ0 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Pcdh20Q8BIZ0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh20Q8BIZ0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdh20Q8BIZ0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.08■□□□□ 0.64
Pcdh20Q8BIZ0 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh20Q8BIZ0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh20Q8BIZ0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdh20Q8BIZ0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Pcdh20Q8BIZ0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdh20Q8BIZ0 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh20Q8BIZ0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh20Q8BIZ0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh20Q8BIZ0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdh20Q8BIZ0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh20Q8BIZ0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh20Q8BIZ0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdh20Q8BIZ0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.06■□□□□ 0.64
Pcdh20Q8BIZ0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh20Q8BIZ0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Pcdh20Q8BIZ0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh20Q8BIZ0 Gm15039-201ENSMUST00000118914 875 ntBASIC19.06■□□□□ 0.64
Pcdh20Q8BIZ0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.06■□□□□ 0.64
Pcdh20Q8BIZ0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh20Q8BIZ0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdh20Q8BIZ0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcdh20Q8BIZ0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh20Q8BIZ0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.05■□□□□ 0.64
Pcdh20Q8BIZ0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh20Q8BIZ0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcdh20Q8BIZ0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.05■□□□□ 0.64
Pcdh20Q8BIZ0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh20Q8BIZ0 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh20Q8BIZ0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh20Q8BIZ0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdh20Q8BIZ0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh20Q8BIZ0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Pcdh20Q8BIZ0 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.05■□□□□ 0.64
Pcdh20Q8BIZ0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh20Q8BIZ0 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdh20Q8BIZ0 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.05■□□□□ 0.64
Pcdh20Q8BIZ0 Gm12821-201ENSMUST00000120022 600 ntBASIC19.04■□□□□ 0.64
Pcdh20Q8BIZ0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.04■□□□□ 0.64
Pcdh20Q8BIZ0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh20Q8BIZ0 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh20Q8BIZ0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh20Q8BIZ0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh20Q8BIZ0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh20Q8BIZ0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh20Q8BIZ0 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdh20Q8BIZ0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh20Q8BIZ0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh20Q8BIZ0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh20Q8BIZ0 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.03■□□□□ 0.64
Pcdh20Q8BIZ0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh20Q8BIZ0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh20Q8BIZ0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh20Q8BIZ0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdh20Q8BIZ0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Pcdh20Q8BIZ0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh20Q8BIZ0 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh20Q8BIZ0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh20Q8BIZ0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh20Q8BIZ0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh20Q8BIZ0 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.02■□□□□ 0.64
Pcdh20Q8BIZ0 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdh20Q8BIZ0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.02■□□□□ 0.64
Pcdh20Q8BIZ0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Pcdh20Q8BIZ0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh20Q8BIZ0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh20Q8BIZ0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Pcdh20Q8BIZ0 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh20Q8BIZ0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh20Q8BIZ0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdh20Q8BIZ0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdh20Q8BIZ0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh20Q8BIZ0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh20Q8BIZ0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19■□□□□ 0.63
Pcdh20Q8BIZ0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh20Q8BIZ0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh20Q8BIZ0 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh20Q8BIZ0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh20Q8BIZ0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19■□□□□ 0.63
Pcdh20Q8BIZ0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh20Q8BIZ0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdh20Q8BIZ0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Pcdh20Q8BIZ0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdh20Q8BIZ0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh20Q8BIZ0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pcdh20Q8BIZ0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
Pcdh20Q8BIZ0 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Pcdh20Q8BIZ0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh20Q8BIZ0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh20Q8BIZ0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh20Q8BIZ0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.99■□□□□ 0.63
Pcdh20Q8BIZ0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh20Q8BIZ0 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
Pcdh20Q8BIZ0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh20Q8BIZ0 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdh20Q8BIZ0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms