Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Ccdc40Q8BI79 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.35■□□□□ 0.85
Ccdc40Q8BI79 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc40Q8BI79 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc40Q8BI79 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc40Q8BI79 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc40Q8BI79 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc40Q8BI79 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc40Q8BI79 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc40Q8BI79 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc40Q8BI79 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc40Q8BI79 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc40Q8BI79 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc40Q8BI79 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.34■□□□□ 0.85
Ccdc40Q8BI79 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc40Q8BI79 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc40Q8BI79 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc40Q8BI79 Gm12922-201ENSMUST00000120626 809 ntBASIC20.34■□□□□ 0.85
Ccdc40Q8BI79 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.34■□□□□ 0.85
Ccdc40Q8BI79 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc40Q8BI79 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc40Q8BI79 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc40Q8BI79 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc40Q8BI79 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc40Q8BI79 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc40Q8BI79 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.33■□□□□ 0.85
Ccdc40Q8BI79 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.33■□□□□ 0.85
Ccdc40Q8BI79 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Ccdc40Q8BI79 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc40Q8BI79 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc40Q8BI79 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc40Q8BI79 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc40Q8BI79 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc40Q8BI79 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc40Q8BI79 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc40Q8BI79 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.32■□□□□ 0.84
Ccdc40Q8BI79 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc40Q8BI79 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc40Q8BI79 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc40Q8BI79 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc40Q8BI79 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc40Q8BI79 Golgb1-201ENSMUST00000023534 498 ntBASIC20.31■□□□□ 0.84
Ccdc40Q8BI79 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc40Q8BI79 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc40Q8BI79 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc40Q8BI79 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc40Q8BI79 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc40Q8BI79 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc40Q8BI79 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc40Q8BI79 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc40Q8BI79 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc40Q8BI79 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc40Q8BI79 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc40Q8BI79 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.3■□□□□ 0.84
Ccdc40Q8BI79 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.3■□□□□ 0.84
Ccdc40Q8BI79 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.3■□□□□ 0.84
Ccdc40Q8BI79 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc40Q8BI79 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc40Q8BI79 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc40Q8BI79 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc40Q8BI79 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.29■□□□□ 0.84
Ccdc40Q8BI79 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc40Q8BI79 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc40Q8BI79 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc40Q8BI79 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc40Q8BI79 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc40Q8BI79 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ccdc40Q8BI79 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc40Q8BI79 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc40Q8BI79 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Ccdc40Q8BI79 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Ccdc40Q8BI79 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc40Q8BI79 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.28■□□□□ 0.84
Ccdc40Q8BI79 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ccdc40Q8BI79 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc40Q8BI79 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc40Q8BI79 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ccdc40Q8BI79 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc40Q8BI79 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.28■□□□□ 0.84
Ccdc40Q8BI79 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc40Q8BI79 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc40Q8BI79 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ccdc40Q8BI79 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc40Q8BI79 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Ccdc40Q8BI79 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc40Q8BI79 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.27■□□□□ 0.84
Ccdc40Q8BI79 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc40Q8BI79 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc40Q8BI79 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc40Q8BI79 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc40Q8BI79 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc40Q8BI79 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc40Q8BI79 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc40Q8BI79 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.26■□□□□ 0.83
Ccdc40Q8BI79 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc40Q8BI79 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc40Q8BI79 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.26■□□□□ 0.83
Ccdc40Q8BI79 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc40Q8BI79 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc40Q8BI79 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms