Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Depdc1bQ8BH88 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.29■■□□□ 1
Depdc1bQ8BH88 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Depdc1bQ8BH88 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Depdc1bQ8BH88 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.29■■□□□ 1
Depdc1bQ8BH88 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Depdc1bQ8BH88 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.29■■□□□ 1
Depdc1bQ8BH88 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.29■■□□□ 1
Depdc1bQ8BH88 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Depdc1bQ8BH88 Gm43137-201ENSMUST00000198052 594 ntBASIC21.29■■□□□ 1
Depdc1bQ8BH88 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.29■■□□□ 1
Depdc1bQ8BH88 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Depdc1bQ8BH88 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Depdc1bQ8BH88 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Depdc1bQ8BH88 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Depdc1bQ8BH88 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.28■■□□□ 1
Depdc1bQ8BH88 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.28■■□□□ 1
Depdc1bQ8BH88 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
Depdc1bQ8BH88 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Depdc1bQ8BH88 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.28■■□□□ 1
Depdc1bQ8BH88 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Depdc1bQ8BH88 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Depdc1bQ8BH88 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.27■■□□□ 1
Depdc1bQ8BH88 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.27■■□□□ 1
Depdc1bQ8BH88 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
Depdc1bQ8BH88 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Depdc1bQ8BH88 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Depdc1bQ8BH88 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Depdc1bQ8BH88 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.27■□□□□ 0.99
Depdc1bQ8BH88 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Depdc1bQ8BH88 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Depdc1bQ8BH88 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Depdc1bQ8BH88 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Depdc1bQ8BH88 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.26■□□□□ 0.99
Depdc1bQ8BH88 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Depdc1bQ8BH88 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Depdc1bQ8BH88 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Depdc1bQ8BH88 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Depdc1bQ8BH88 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Depdc1bQ8BH88 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Depdc1bQ8BH88 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Depdc1bQ8BH88 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Depdc1bQ8BH88 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Depdc1bQ8BH88 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Depdc1bQ8BH88 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.25■□□□□ 0.99
Depdc1bQ8BH88 Gm6139-201ENSMUST00000079261 882 ntBASIC21.25■□□□□ 0.99
Depdc1bQ8BH88 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Depdc1bQ8BH88 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Depdc1bQ8BH88 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Depdc1bQ8BH88 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Depdc1bQ8BH88 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Depdc1bQ8BH88 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Depdc1bQ8BH88 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Depdc1bQ8BH88 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Depdc1bQ8BH88 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Depdc1bQ8BH88 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.24■□□□□ 0.99
Depdc1bQ8BH88 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Depdc1bQ8BH88 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Depdc1bQ8BH88 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Depdc1bQ8BH88 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.24■□□□□ 0.99
Depdc1bQ8BH88 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Depdc1bQ8BH88 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Depdc1bQ8BH88 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Depdc1bQ8BH88 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Depdc1bQ8BH88 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Depdc1bQ8BH88 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Depdc1bQ8BH88 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Depdc1bQ8BH88 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Depdc1bQ8BH88 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Depdc1bQ8BH88 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Depdc1bQ8BH88 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Depdc1bQ8BH88 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Depdc1bQ8BH88 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
Depdc1bQ8BH88 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Depdc1bQ8BH88 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Depdc1bQ8BH88 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Depdc1bQ8BH88 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Depdc1bQ8BH88 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Depdc1bQ8BH88 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Depdc1bQ8BH88 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Depdc1bQ8BH88 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Depdc1bQ8BH88 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Depdc1bQ8BH88 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Depdc1bQ8BH88 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Depdc1bQ8BH88 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Depdc1bQ8BH88 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Depdc1bQ8BH88 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.21■□□□□ 0.99
Depdc1bQ8BH88 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Depdc1bQ8BH88 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Depdc1bQ8BH88 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.21■□□□□ 0.99
Depdc1bQ8BH88 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Depdc1bQ8BH88 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Depdc1bQ8BH88 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.21■□□□□ 0.99
Depdc1bQ8BH88 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.99
Depdc1bQ8BH88 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Depdc1bQ8BH88 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Depdc1bQ8BH88 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Depdc1bQ8BH88 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.2■□□□□ 0.98
Depdc1bQ8BH88 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.2■□□□□ 0.98
Depdc1bQ8BH88 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms