Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc5a7Q8BGY9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc5a7Q8BGY9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc5a7Q8BGY9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc5a7Q8BGY9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Slc5a7Q8BGY9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc5a7Q8BGY9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.19■□□□□ 0.34
Slc5a7Q8BGY9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc5a7Q8BGY9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc5a7Q8BGY9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc5a7Q8BGY9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc5a7Q8BGY9 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc5a7Q8BGY9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc5a7Q8BGY9 Gm14523-201ENSMUST00000117260 558 ntBASIC17.18■□□□□ 0.34
Slc5a7Q8BGY9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc5a7Q8BGY9 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc5a7Q8BGY9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc5a7Q8BGY9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc5a7Q8BGY9 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Slc5a7Q8BGY9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.18■□□□□ 0.34
Slc5a7Q8BGY9 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Slc5a7Q8BGY9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc5a7Q8BGY9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc5a7Q8BGY9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc5a7Q8BGY9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc5a7Q8BGY9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc5a7Q8BGY9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc5a7Q8BGY9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc5a7Q8BGY9 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.16■□□□□ 0.34
Slc5a7Q8BGY9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Slc5a7Q8BGY9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Slc5a7Q8BGY9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Slc5a7Q8BGY9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc5a7Q8BGY9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Slc5a7Q8BGY9 Rarb-207ENSMUST00000225921 2756 ntBASIC17.16■□□□□ 0.34
Slc5a7Q8BGY9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc5a7Q8BGY9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc5a7Q8BGY9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc5a7Q8BGY9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc5a7Q8BGY9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc5a7Q8BGY9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc5a7Q8BGY9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc5a7Q8BGY9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc5a7Q8BGY9 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.15■□□□□ 0.34
Slc5a7Q8BGY9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc5a7Q8BGY9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Slc5a7Q8BGY9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc5a7Q8BGY9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc5a7Q8BGY9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.15■□□□□ 0.34
Slc5a7Q8BGY9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Slc5a7Q8BGY9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc5a7Q8BGY9 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc5a7Q8BGY9 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc5a7Q8BGY9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc5a7Q8BGY9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc5a7Q8BGY9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Slc5a7Q8BGY9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Slc5a7Q8BGY9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Slc5a7Q8BGY9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Slc5a7Q8BGY9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Slc5a7Q8BGY9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc5a7Q8BGY9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Slc5a7Q8BGY9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc5a7Q8BGY9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc5a7Q8BGY9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc5a7Q8BGY9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc5a7Q8BGY9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc5a7Q8BGY9 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Slc5a7Q8BGY9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc5a7Q8BGY9 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Slc5a7Q8BGY9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc5a7Q8BGY9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Slc5a7Q8BGY9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.13■□□□□ 0.33
Slc5a7Q8BGY9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc5a7Q8BGY9 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.13■□□□□ 0.33
Slc5a7Q8BGY9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.13■□□□□ 0.33
Slc5a7Q8BGY9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.13■□□□□ 0.33
Slc5a7Q8BGY9 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.13■□□□□ 0.33
Slc5a7Q8BGY9 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.13■□□□□ 0.33
Slc5a7Q8BGY9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc5a7Q8BGY9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc5a7Q8BGY9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc5a7Q8BGY9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Slc5a7Q8BGY9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc5a7Q8BGY9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc5a7Q8BGY9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.12■□□□□ 0.33
Slc5a7Q8BGY9 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Slc5a7Q8BGY9 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc5a7Q8BGY9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc5a7Q8BGY9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc5a7Q8BGY9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc5a7Q8BGY9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.12■□□□□ 0.33
Slc5a7Q8BGY9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc5a7Q8BGY9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc5a7Q8BGY9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Slc5a7Q8BGY9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Slc5a7Q8BGY9 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc5a7Q8BGY9 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc5a7Q8BGY9 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc5a7Q8BGY9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms