Protein–RNA interactions for Protein: Q8BFS6

Cpped1, Serine/threonine-protein phosphatase CPPED1, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpped1Q8BFS6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpped1Q8BFS6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpped1Q8BFS6 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cpped1Q8BFS6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cpped1Q8BFS6 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpped1Q8BFS6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpped1Q8BFS6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
Cpped1Q8BFS6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
Cpped1Q8BFS6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpped1Q8BFS6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpped1Q8BFS6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cpped1Q8BFS6 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cpped1Q8BFS6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cpped1Q8BFS6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpped1Q8BFS6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpped1Q8BFS6 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpped1Q8BFS6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpped1Q8BFS6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpped1Q8BFS6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cpped1Q8BFS6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpped1Q8BFS6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cpped1Q8BFS6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cpped1Q8BFS6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cpped1Q8BFS6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cpped1Q8BFS6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpped1Q8BFS6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpped1Q8BFS6 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpped1Q8BFS6 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Cpped1Q8BFS6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cpped1Q8BFS6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpped1Q8BFS6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.19■□□□□ 0.66
Cpped1Q8BFS6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpped1Q8BFS6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.19■□□□□ 0.66
Cpped1Q8BFS6 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.19■□□□□ 0.66
Cpped1Q8BFS6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpped1Q8BFS6 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpped1Q8BFS6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpped1Q8BFS6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpped1Q8BFS6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cpped1Q8BFS6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cpped1Q8BFS6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpped1Q8BFS6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cpped1Q8BFS6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpped1Q8BFS6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cpped1Q8BFS6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cpped1Q8BFS6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.18■□□□□ 0.66
Cpped1Q8BFS6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.18■□□□□ 0.66
Cpped1Q8BFS6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpped1Q8BFS6 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cpped1Q8BFS6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cpped1Q8BFS6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpped1Q8BFS6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpped1Q8BFS6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpped1Q8BFS6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpped1Q8BFS6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Cpped1Q8BFS6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cpped1Q8BFS6 Mir7075-201ENSMUST00000184187 82 ntBASIC19.17■□□□□ 0.66
Cpped1Q8BFS6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cpped1Q8BFS6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.17■□□□□ 0.66
Cpped1Q8BFS6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cpped1Q8BFS6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpped1Q8BFS6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpped1Q8BFS6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cpped1Q8BFS6 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.17■□□□□ 0.66
Cpped1Q8BFS6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cpped1Q8BFS6 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cpped1Q8BFS6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpped1Q8BFS6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpped1Q8BFS6 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.17■□□□□ 0.66
Cpped1Q8BFS6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.16■□□□□ 0.66
Cpped1Q8BFS6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpped1Q8BFS6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpped1Q8BFS6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cpped1Q8BFS6 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpped1Q8BFS6 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
Cpped1Q8BFS6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Cpped1Q8BFS6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpped1Q8BFS6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpped1Q8BFS6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpped1Q8BFS6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpped1Q8BFS6 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cpped1Q8BFS6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpped1Q8BFS6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpped1Q8BFS6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpped1Q8BFS6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpped1Q8BFS6 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.15■□□□□ 0.66
Cpped1Q8BFS6 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cpped1Q8BFS6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cpped1Q8BFS6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cpped1Q8BFS6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cpped1Q8BFS6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.15■□□□□ 0.66
Cpped1Q8BFS6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cpped1Q8BFS6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cpped1Q8BFS6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpped1Q8BFS6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cpped1Q8BFS6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cpped1Q8BFS6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpped1Q8BFS6 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.13■□□□□ 0.65
Cpped1Q8BFS6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpped1Q8BFS6 Iqck-206ENSMUST00000208658 2891 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms