Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ubp1Q811S7 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.33■□□□□ 0.68
Ubp1Q811S7 Gm8493-201ENSMUST00000196881 489 ntBASIC19.33■□□□□ 0.68
Ubp1Q811S7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.33■□□□□ 0.68
Ubp1Q811S7 Gm6139-201ENSMUST00000079261 882 ntBASIC19.33■□□□□ 0.68
Ubp1Q811S7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ubp1Q811S7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ubp1Q811S7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ubp1Q811S7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ubp1Q811S7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ubp1Q811S7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ubp1Q811S7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ubp1Q811S7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ubp1Q811S7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ubp1Q811S7 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.32■□□□□ 0.68
Ubp1Q811S7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.32■□□□□ 0.68
Ubp1Q811S7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ubp1Q811S7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ubp1Q811S7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ubp1Q811S7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ubp1Q811S7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.32■□□□□ 0.68
Ubp1Q811S7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ubp1Q811S7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
Ubp1Q811S7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ubp1Q811S7 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ubp1Q811S7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ubp1Q811S7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ubp1Q811S7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ubp1Q811S7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ubp1Q811S7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ubp1Q811S7 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.31■□□□□ 0.68
Ubp1Q811S7 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubp1Q811S7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubp1Q811S7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubp1Q811S7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubp1Q811S7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.3■□□□□ 0.68
Ubp1Q811S7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.3■□□□□ 0.68
Ubp1Q811S7 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.3■□□□□ 0.68
Ubp1Q811S7 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.3■□□□□ 0.68
Ubp1Q811S7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubp1Q811S7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ubp1Q811S7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ubp1Q811S7 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.3■□□□□ 0.68
Ubp1Q811S7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.29■□□□□ 0.68
Ubp1Q811S7 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ubp1Q811S7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ubp1Q811S7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Ubp1Q811S7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.29■□□□□ 0.68
Ubp1Q811S7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubp1Q811S7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ubp1Q811S7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Ubp1Q811S7 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubp1Q811S7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Ubp1Q811S7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ubp1Q811S7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.28■□□□□ 0.68
Ubp1Q811S7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ubp1Q811S7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubp1Q811S7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ubp1Q811S7 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ubp1Q811S7 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.27■□□□□ 0.68
Ubp1Q811S7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Ubp1Q811S7 Notumos-201ENSMUST00000151998 2659 ntBASIC19.27■□□□□ 0.67
Ubp1Q811S7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubp1Q811S7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ubp1Q811S7 Gm43017-201ENSMUST00000198296 752 ntBASIC19.26■□□□□ 0.67
Ubp1Q811S7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.26■□□□□ 0.67
Ubp1Q811S7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubp1Q811S7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.26■□□□□ 0.67
Ubp1Q811S7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ubp1Q811S7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubp1Q811S7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubp1Q811S7 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubp1Q811S7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubp1Q811S7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubp1Q811S7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.25■□□□□ 0.67
Ubp1Q811S7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubp1Q811S7 Gm43173-201ENSMUST00000202246 593 ntBASIC19.25■□□□□ 0.67
Ubp1Q811S7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ubp1Q811S7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ubp1Q811S7 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ubp1Q811S7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 219.9 ms