Protein–RNA interactions for Protein: Q80Z24

Negr1, Neuronal growth regulator 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Negr1Q80Z24 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Negr1Q80Z24 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Negr1Q80Z24 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Negr1Q80Z24 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Negr1Q80Z24 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Negr1Q80Z24 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Negr1Q80Z24 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Negr1Q80Z24 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Negr1Q80Z24 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Negr1Q80Z24 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Negr1Q80Z24 Gm21956-201ENSMUST00000179946 522 ntBASIC17.27■□□□□ 0.36
Negr1Q80Z24 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Negr1Q80Z24 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Negr1Q80Z24 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Negr1Q80Z24 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Negr1Q80Z24 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Negr1Q80Z24 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.26■□□□□ 0.35
Negr1Q80Z24 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.26■□□□□ 0.35
Negr1Q80Z24 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Negr1Q80Z24 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Negr1Q80Z24 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Negr1Q80Z24 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
Negr1Q80Z24 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Negr1Q80Z24 Iqck-206ENSMUST00000208658 2891 ntBASIC17.26■□□□□ 0.35
Negr1Q80Z24 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Negr1Q80Z24 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Negr1Q80Z24 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Negr1Q80Z24 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
Negr1Q80Z24 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Negr1Q80Z24 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Negr1Q80Z24 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
Negr1Q80Z24 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Negr1Q80Z24 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Negr1Q80Z24 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.25■□□□□ 0.35
Negr1Q80Z24 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Negr1Q80Z24 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Negr1Q80Z24 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Negr1Q80Z24 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.24■□□□□ 0.35
Negr1Q80Z24 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Negr1Q80Z24 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Negr1Q80Z24 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Negr1Q80Z24 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.24■□□□□ 0.35
Negr1Q80Z24 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Negr1Q80Z24 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.24■□□□□ 0.35
Negr1Q80Z24 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Negr1Q80Z24 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Negr1Q80Z24 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Negr1Q80Z24 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Negr1Q80Z24 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Negr1Q80Z24 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.23■□□□□ 0.35
Negr1Q80Z24 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Negr1Q80Z24 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Negr1Q80Z24 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Negr1Q80Z24 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Negr1Q80Z24 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Negr1Q80Z24 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Negr1Q80Z24 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Negr1Q80Z24 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Negr1Q80Z24 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Negr1Q80Z24 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Negr1Q80Z24 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Negr1Q80Z24 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Negr1Q80Z24 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Negr1Q80Z24 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.21■□□□□ 0.35
Negr1Q80Z24 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Negr1Q80Z24 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Negr1Q80Z24 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Negr1Q80Z24 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Negr1Q80Z24 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Negr1Q80Z24 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Negr1Q80Z24 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Negr1Q80Z24 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Negr1Q80Z24 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.21■□□□□ 0.34
Negr1Q80Z24 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Negr1Q80Z24 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Negr1Q80Z24 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Negr1Q80Z24 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.2■□□□□ 0.34
Negr1Q80Z24 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Negr1Q80Z24 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Negr1Q80Z24 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Negr1Q80Z24 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Negr1Q80Z24 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Negr1Q80Z24 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Negr1Q80Z24 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Negr1Q80Z24 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Negr1Q80Z24 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Negr1Q80Z24 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Negr1Q80Z24 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Negr1Q80Z24 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Negr1Q80Z24 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.19■□□□□ 0.34
Negr1Q80Z24 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Negr1Q80Z24 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.19■□□□□ 0.34
Negr1Q80Z24 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Negr1Q80Z24 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Negr1Q80Z24 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Negr1Q80Z24 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Negr1Q80Z24 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Negr1Q80Z24 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Negr1Q80Z24 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
Negr1Q80Z24 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms