Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nucks1Q80XU3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.97■□□□□ 0.95
Nucks1Q80XU3 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nucks1Q80XU3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nucks1Q80XU3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nucks1Q80XU3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
Nucks1Q80XU3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nucks1Q80XU3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nucks1Q80XU3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.96■□□□□ 0.95
Nucks1Q80XU3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.96■□□□□ 0.95
Nucks1Q80XU3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
Nucks1Q80XU3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nucks1Q80XU3 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nucks1Q80XU3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nucks1Q80XU3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nucks1Q80XU3 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Nucks1Q80XU3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nucks1Q80XU3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nucks1Q80XU3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.95■□□□□ 0.94
Nucks1Q80XU3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nucks1Q80XU3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Nucks1Q80XU3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nucks1Q80XU3 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.95■□□□□ 0.94
Nucks1Q80XU3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nucks1Q80XU3 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nucks1Q80XU3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nucks1Q80XU3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.94■□□□□ 0.94
Nucks1Q80XU3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nucks1Q80XU3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nucks1Q80XU3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nucks1Q80XU3 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nucks1Q80XU3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nucks1Q80XU3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nucks1Q80XU3 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.94■□□□□ 0.94
Nucks1Q80XU3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nucks1Q80XU3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nucks1Q80XU3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Nucks1Q80XU3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Nucks1Q80XU3 Iqck-206ENSMUST00000208658 2891 ntBASIC20.93■□□□□ 0.94
Nucks1Q80XU3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.93■□□□□ 0.94
Nucks1Q80XU3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.93■□□□□ 0.94
Nucks1Q80XU3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.93■□□□□ 0.94
Nucks1Q80XU3 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.93■□□□□ 0.94
Nucks1Q80XU3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nucks1Q80XU3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nucks1Q80XU3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nucks1Q80XU3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.92■□□□□ 0.94
Nucks1Q80XU3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nucks1Q80XU3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nucks1Q80XU3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Nucks1Q80XU3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nucks1Q80XU3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Nucks1Q80XU3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nucks1Q80XU3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Nucks1Q80XU3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Nucks1Q80XU3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nucks1Q80XU3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.91■□□□□ 0.94
Nucks1Q80XU3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Nucks1Q80XU3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Nucks1Q80XU3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Nucks1Q80XU3 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nucks1Q80XU3 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nucks1Q80XU3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nucks1Q80XU3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nucks1Q80XU3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nucks1Q80XU3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nucks1Q80XU3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Nucks1Q80XU3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Nucks1Q80XU3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Nucks1Q80XU3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.89■□□□□ 0.94
Nucks1Q80XU3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nucks1Q80XU3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.89■□□□□ 0.93
Nucks1Q80XU3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.89■□□□□ 0.93
Nucks1Q80XU3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nucks1Q80XU3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Nucks1Q80XU3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nucks1Q80XU3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nucks1Q80XU3 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nucks1Q80XU3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nucks1Q80XU3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nucks1Q80XU3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nucks1Q80XU3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nucks1Q80XU3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nucks1Q80XU3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Nucks1Q80XU3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nucks1Q80XU3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Nucks1Q80XU3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nucks1Q80XU3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.88■□□□□ 0.93
Nucks1Q80XU3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.88■□□□□ 0.93
Nucks1Q80XU3 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.88■□□□□ 0.93
Nucks1Q80XU3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nucks1Q80XU3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Nucks1Q80XU3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Nucks1Q80XU3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Nucks1Q80XU3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nucks1Q80XU3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nucks1Q80XU3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nucks1Q80XU3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nucks1Q80XU3 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Nucks1Q80XU3 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms