Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.24■□□□□ 0.67
Ccdc116Q80X53 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc116Q80X53 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc116Q80X53 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc116Q80X53 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc116Q80X53 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc116Q80X53 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc116Q80X53 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc116Q80X53 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Ccdc116Q80X53 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.23■□□□□ 0.67
Ccdc116Q80X53 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc116Q80X53 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc116Q80X53 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc116Q80X53 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc116Q80X53 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc116Q80X53 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc116Q80X53 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc116Q80X53 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc116Q80X53 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.22■□□□□ 0.67
Ccdc116Q80X53 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc116Q80X53 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ccdc116Q80X53 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc116Q80X53 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc116Q80X53 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ccdc116Q80X53 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Ccdc116Q80X53 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc116Q80X53 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc116Q80X53 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Ccdc116Q80X53 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.21■□□□□ 0.67
Ccdc116Q80X53 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.21■□□□□ 0.67
Ccdc116Q80X53 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.21■□□□□ 0.67
Ccdc116Q80X53 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.21■□□□□ 0.67
Ccdc116Q80X53 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ccdc116Q80X53 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.2■□□□□ 0.66
Ccdc116Q80X53 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc116Q80X53 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Ccdc116Q80X53 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.2■□□□□ 0.66
Ccdc116Q80X53 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc116Q80X53 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ccdc116Q80X53 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Ccdc116Q80X53 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Ccdc116Q80X53 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc116Q80X53 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc116Q80X53 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc116Q80X53 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc116Q80X53 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.19■□□□□ 0.66
Ccdc116Q80X53 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
Ccdc116Q80X53 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc116Q80X53 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.19■□□□□ 0.66
Ccdc116Q80X53 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc116Q80X53 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc116Q80X53 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc116Q80X53 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ccdc116Q80X53 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc116Q80X53 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc116Q80X53 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.18■□□□□ 0.66
Ccdc116Q80X53 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Ccdc116Q80X53 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc116Q80X53 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc116Q80X53 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc116Q80X53 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ccdc116Q80X53 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Ccdc116Q80X53 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc116Q80X53 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc116Q80X53 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc116Q80X53 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.17■□□□□ 0.66
Ccdc116Q80X53 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Ccdc116Q80X53 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Ccdc116Q80X53 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc116Q80X53 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc116Q80X53 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc116Q80X53 AA386476-201ENSMUST00000098781 1665 ntBASIC19.17■□□□□ 0.66
Ccdc116Q80X53 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ccdc116Q80X53 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc116Q80X53 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc116Q80X53 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc116Q80X53 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc116Q80X53 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc116Q80X53 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc116Q80X53 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc116Q80X53 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc116Q80X53 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccdc116Q80X53 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ccdc116Q80X53 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc116Q80X53 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccdc116Q80X53 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc116Q80X53 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ccdc116Q80X53 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.16■□□□□ 0.66
Ccdc116Q80X53 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
Ccdc116Q80X53 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc116Q80X53 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc116Q80X53 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc116Q80X53 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ccdc116Q80X53 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.14■□□□□ 0.66
Ccdc116Q80X53 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ccdc116Q80X53 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc116Q80X53 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ccdc116Q80X53 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ccdc116Q80X53 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.14■□□□□ 0.65
Ccdc116Q80X53 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms