Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim36Q80WG7 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Trim36Q80WG7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trim36Q80WG7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim36Q80WG7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trim36Q80WG7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim36Q80WG7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim36Q80WG7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim36Q80WG7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim36Q80WG7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim36Q80WG7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim36Q80WG7 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim36Q80WG7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim36Q80WG7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.88■□□□□ 0.61
Trim36Q80WG7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trim36Q80WG7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trim36Q80WG7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Trim36Q80WG7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim36Q80WG7 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim36Q80WG7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.87■□□□□ 0.61
Trim36Q80WG7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.87■□□□□ 0.61
Trim36Q80WG7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.87■□□□□ 0.61
Trim36Q80WG7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Trim36Q80WG7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.87■□□□□ 0.61
Trim36Q80WG7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Trim36Q80WG7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim36Q80WG7 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim36Q80WG7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Trim36Q80WG7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trim36Q80WG7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Trim36Q80WG7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim36Q80WG7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim36Q80WG7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim36Q80WG7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim36Q80WG7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim36Q80WG7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
Trim36Q80WG7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim36Q80WG7 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim36Q80WG7 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.86■□□□□ 0.61
Trim36Q80WG7 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim36Q80WG7 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.86■□□□□ 0.61
Trim36Q80WG7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim36Q80WG7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Trim36Q80WG7 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.86■□□□□ 0.61
Trim36Q80WG7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trim36Q80WG7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trim36Q80WG7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim36Q80WG7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
Trim36Q80WG7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.85■□□□□ 0.61
Trim36Q80WG7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.85■□□□□ 0.61
Trim36Q80WG7 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim36Q80WG7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim36Q80WG7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim36Q80WG7 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim36Q80WG7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim36Q80WG7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim36Q80WG7 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.84■□□□□ 0.61
Trim36Q80WG7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim36Q80WG7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trim36Q80WG7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim36Q80WG7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim36Q80WG7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.84■□□□□ 0.61
Trim36Q80WG7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim36Q80WG7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trim36Q80WG7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trim36Q80WG7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim36Q80WG7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Trim36Q80WG7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trim36Q80WG7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim36Q80WG7 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim36Q80WG7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Trim36Q80WG7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.83■□□□□ 0.6
Trim36Q80WG7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.83■□□□□ 0.6
Trim36Q80WG7 Golgb1-201ENSMUST00000023534 498 ntBASIC18.83■□□□□ 0.6
Trim36Q80WG7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trim36Q80WG7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim36Q80WG7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim36Q80WG7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim36Q80WG7 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.83■□□□□ 0.6
Trim36Q80WG7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim36Q80WG7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim36Q80WG7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim36Q80WG7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim36Q80WG7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim36Q80WG7 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim36Q80WG7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim36Q80WG7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim36Q80WG7 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim36Q80WG7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Trim36Q80WG7 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim36Q80WG7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trim36Q80WG7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim36Q80WG7 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trim36Q80WG7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim36Q80WG7 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim36Q80WG7 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim36Q80WG7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim36Q80WG7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim36Q80WG7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim36Q80WG7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms