Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp8Q80U87 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.57■□□□□ 0.72
Usp8Q80U87 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Usp8Q80U87 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Usp8Q80U87 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp8Q80U87 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp8Q80U87 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp8Q80U87 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp8Q80U87 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp8Q80U87 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp8Q80U87 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp8Q80U87 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp8Q80U87 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp8Q80U87 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Usp8Q80U87 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp8Q80U87 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp8Q80U87 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp8Q80U87 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp8Q80U87 Gm22238-201ENSMUST00000175222 88 ntBASIC19.56■□□□□ 0.72
Usp8Q80U87 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
Usp8Q80U87 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Usp8Q80U87 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp8Q80U87 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Usp8Q80U87 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp8Q80U87 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp8Q80U87 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp8Q80U87 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp8Q80U87 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Usp8Q80U87 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.55■□□□□ 0.72
Usp8Q80U87 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp8Q80U87 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.55■□□□□ 0.72
Usp8Q80U87 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.55■□□□□ 0.72
Usp8Q80U87 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp8Q80U87 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp8Q80U87 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp8Q80U87 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.55■□□□□ 0.72
Usp8Q80U87 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp8Q80U87 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp8Q80U87 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp8Q80U87 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.54■□□□□ 0.72
Usp8Q80U87 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp8Q80U87 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp8Q80U87 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp8Q80U87 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Usp8Q80U87 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
Usp8Q80U87 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp8Q80U87 Mir6236-201ENSMUST00000184437 123 ntBASIC19.54■□□□□ 0.72
Usp8Q80U87 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.54■□□□□ 0.72
Usp8Q80U87 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp8Q80U87 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp8Q80U87 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp8Q80U87 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp8Q80U87 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp8Q80U87 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp8Q80U87 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp8Q80U87 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp8Q80U87 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp8Q80U87 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp8Q80U87 Rps24-207ENSMUST00000224568 714 ntBASIC19.53■□□□□ 0.72
Usp8Q80U87 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp8Q80U87 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp8Q80U87 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp8Q80U87 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp8Q80U87 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp8Q80U87 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp8Q80U87 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
Usp8Q80U87 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.52■□□□□ 0.72
Usp8Q80U87 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp8Q80U87 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Usp8Q80U87 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp8Q80U87 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp8Q80U87 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.52■□□□□ 0.72
Usp8Q80U87 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp8Q80U87 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp8Q80U87 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp8Q80U87 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Usp8Q80U87 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Usp8Q80U87 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp8Q80U87 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp8Q80U87 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.51■□□□□ 0.71
Usp8Q80U87 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp8Q80U87 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.51■□□□□ 0.71
Usp8Q80U87 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp8Q80U87 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.51■□□□□ 0.71
Usp8Q80U87 Gm45102-201ENSMUST00000207427 857 ntBASIC19.51■□□□□ 0.71
Usp8Q80U87 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp8Q80U87 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.51■□□□□ 0.71
Usp8Q80U87 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Usp8Q80U87 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp8Q80U87 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp8Q80U87 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp8Q80U87 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp8Q80U87 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp8Q80U87 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp8Q80U87 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp8Q80U87 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp8Q80U87 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Usp8Q80U87 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.5■□□□□ 0.71
Usp8Q80U87 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Usp8Q80U87 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms