Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pif1Q80SX8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pif1Q80SX8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pif1Q80SX8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.09■□□□□ 0.49
Pif1Q80SX8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pif1Q80SX8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.09■□□□□ 0.49
Pif1Q80SX8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pif1Q80SX8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pif1Q80SX8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Pif1Q80SX8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.09■□□□□ 0.49
Pif1Q80SX8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.09■□□□□ 0.49
Pif1Q80SX8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.09■□□□□ 0.49
Pif1Q80SX8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.09■□□□□ 0.49
Pif1Q80SX8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.09■□□□□ 0.49
Pif1Q80SX8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pif1Q80SX8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.09■□□□□ 0.49
Pif1Q80SX8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.09■□□□□ 0.49
Pif1Q80SX8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pif1Q80SX8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pif1Q80SX8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pif1Q80SX8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pif1Q80SX8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Pif1Q80SX8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
Pif1Q80SX8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pif1Q80SX8 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.08■□□□□ 0.48
Pif1Q80SX8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.08■□□□□ 0.48
Pif1Q80SX8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pif1Q80SX8 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pif1Q80SX8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pif1Q80SX8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Pif1Q80SX8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Pif1Q80SX8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pif1Q80SX8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pif1Q80SX8 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pif1Q80SX8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pif1Q80SX8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pif1Q80SX8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pif1Q80SX8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pif1Q80SX8 Gm27011-201ENSMUST00000182352 972 ntBASIC18.07■□□□□ 0.48
Pif1Q80SX8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Pif1Q80SX8 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pif1Q80SX8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pif1Q80SX8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pif1Q80SX8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pif1Q80SX8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pif1Q80SX8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pif1Q80SX8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pif1Q80SX8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pif1Q80SX8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pif1Q80SX8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pif1Q80SX8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pif1Q80SX8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pif1Q80SX8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pif1Q80SX8 Gm13234-201ENSMUST00000120010 747 ntBASIC18.06■□□□□ 0.48
Pif1Q80SX8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pif1Q80SX8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.06■□□□□ 0.48
Pif1Q80SX8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pif1Q80SX8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pif1Q80SX8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pif1Q80SX8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pif1Q80SX8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pif1Q80SX8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pif1Q80SX8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pif1Q80SX8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pif1Q80SX8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Pif1Q80SX8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pif1Q80SX8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Pif1Q80SX8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pif1Q80SX8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pif1Q80SX8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.05■□□□□ 0.48
Pif1Q80SX8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Pif1Q80SX8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.05■□□□□ 0.48
Pif1Q80SX8 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.05■□□□□ 0.48
Pif1Q80SX8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.05■□□□□ 0.48
Pif1Q80SX8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Pif1Q80SX8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pif1Q80SX8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pif1Q80SX8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.04■□□□□ 0.48
Pif1Q80SX8 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.04■□□□□ 0.48
Pif1Q80SX8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pif1Q80SX8 Reep4-203ENSMUST00000226563 1444 ntBASIC18.04■□□□□ 0.48
Pif1Q80SX8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pif1Q80SX8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
Pif1Q80SX8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pif1Q80SX8 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.03■□□□□ 0.48
Pif1Q80SX8 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pif1Q80SX8 Gm27801-201ENSMUST00000184174 223 ntBASIC18.03■□□□□ 0.48
Pif1Q80SX8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pif1Q80SX8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pif1Q80SX8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pif1Q80SX8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pif1Q80SX8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pif1Q80SX8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pif1Q80SX8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Pif1Q80SX8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.02■□□□□ 0.48
Pif1Q80SX8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pif1Q80SX8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pif1Q80SX8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Pif1Q80SX8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pif1Q80SX8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 153.7 ms