Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scn4bQ7M729 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.13■□□□□ 0.65
Scn4bQ7M729 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.13■□□□□ 0.65
Scn4bQ7M729 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.13■□□□□ 0.65
Scn4bQ7M729 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.13■□□□□ 0.65
Scn4bQ7M729 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn4bQ7M729 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn4bQ7M729 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scn4bQ7M729 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scn4bQ7M729 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn4bQ7M729 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Scn4bQ7M729 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.12■□□□□ 0.65
Scn4bQ7M729 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scn4bQ7M729 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn4bQ7M729 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn4bQ7M729 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scn4bQ7M729 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn4bQ7M729 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.11■□□□□ 0.65
Scn4bQ7M729 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
Scn4bQ7M729 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn4bQ7M729 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.11■□□□□ 0.65
Scn4bQ7M729 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scn4bQ7M729 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Scn4bQ7M729 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.1■□□□□ 0.65
Scn4bQ7M729 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scn4bQ7M729 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scn4bQ7M729 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn4bQ7M729 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.1■□□□□ 0.65
Scn4bQ7M729 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn4bQ7M729 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn4bQ7M729 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn4bQ7M729 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scn4bQ7M729 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn4bQ7M729 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.09■□□□□ 0.65
Scn4bQ7M729 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn4bQ7M729 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn4bQ7M729 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Scn4bQ7M729 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Scn4bQ7M729 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn4bQ7M729 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.09■□□□□ 0.65
Scn4bQ7M729 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn4bQ7M729 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Scn4bQ7M729 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Scn4bQ7M729 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Scn4bQ7M729 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn4bQ7M729 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn4bQ7M729 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn4bQ7M729 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Scn4bQ7M729 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Scn4bQ7M729 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Scn4bQ7M729 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Scn4bQ7M729 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn4bQ7M729 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn4bQ7M729 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scn4bQ7M729 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn4bQ7M729 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scn4bQ7M729 Gm21956-201ENSMUST00000179946 522 ntBASIC19.07■□□□□ 0.64
Scn4bQ7M729 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scn4bQ7M729 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.07■□□□□ 0.64
Scn4bQ7M729 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Scn4bQ7M729 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.07■□□□□ 0.64
Scn4bQ7M729 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Scn4bQ7M729 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Scn4bQ7M729 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Scn4bQ7M729 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn4bQ7M729 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn4bQ7M729 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn4bQ7M729 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Scn4bQ7M729 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Scn4bQ7M729 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Scn4bQ7M729 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Scn4bQ7M729 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.06■□□□□ 0.64
Scn4bQ7M729 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn4bQ7M729 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Scn4bQ7M729 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Scn4bQ7M729 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn4bQ7M729 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Scn4bQ7M729 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn4bQ7M729 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn4bQ7M729 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.05■□□□□ 0.64
Scn4bQ7M729 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn4bQ7M729 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn4bQ7M729 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn4bQ7M729 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Scn4bQ7M729 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Scn4bQ7M729 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn4bQ7M729 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn4bQ7M729 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn4bQ7M729 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn4bQ7M729 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn4bQ7M729 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn4bQ7M729 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Scn4bQ7M729 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.04■□□□□ 0.64
Scn4bQ7M729 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.04■□□□□ 0.64
Scn4bQ7M729 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Scn4bQ7M729 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Scn4bQ7M729 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.04■□□□□ 0.64
Scn4bQ7M729 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Scn4bQ7M729 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Scn4bQ7M729 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms