Protein–RNA interactions for Protein: Q6ZWM4

Lsm8, U6 snRNA-associated Sm-like protein LSm8, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm8Q6ZWM4 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.65■□□□□ 0.9
Lsm8Q6ZWM4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.65■□□□□ 0.9
Lsm8Q6ZWM4 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm8Q6ZWM4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm8Q6ZWM4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm8Q6ZWM4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Lsm8Q6ZWM4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Lsm8Q6ZWM4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Lsm8Q6ZWM4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.64■□□□□ 0.89
Lsm8Q6ZWM4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Lsm8Q6ZWM4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Lsm8Q6ZWM4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.64■□□□□ 0.89
Lsm8Q6ZWM4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Lsm8Q6ZWM4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lsm8Q6ZWM4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.64■□□□□ 0.89
Lsm8Q6ZWM4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lsm8Q6ZWM4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Lsm8Q6ZWM4 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm8Q6ZWM4 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm8Q6ZWM4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.63■□□□□ 0.89
Lsm8Q6ZWM4 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm8Q6ZWM4 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm8Q6ZWM4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm8Q6ZWM4 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm8Q6ZWM4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm8Q6ZWM4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Lsm8Q6ZWM4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm8Q6ZWM4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm8Q6ZWM4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm8Q6ZWM4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm8Q6ZWM4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm8Q6ZWM4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm8Q6ZWM4 Gm12821-201ENSMUST00000120022 600 ntBASIC20.62■□□□□ 0.89
Lsm8Q6ZWM4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.62■□□□□ 0.89
Lsm8Q6ZWM4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm8Q6ZWM4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Lsm8Q6ZWM4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Lsm8Q6ZWM4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm8Q6ZWM4 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm8Q6ZWM4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm8Q6ZWM4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm8Q6ZWM4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm8Q6ZWM4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm8Q6ZWM4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm8Q6ZWM4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm8Q6ZWM4 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm8Q6ZWM4 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm8Q6ZWM4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm8Q6ZWM4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm8Q6ZWM4 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Lsm8Q6ZWM4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lsm8Q6ZWM4 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.6■□□□□ 0.89
Lsm8Q6ZWM4 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Lsm8Q6ZWM4 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lsm8Q6ZWM4 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lsm8Q6ZWM4 Gm12251-201ENSMUST00000117893 792 ntBASIC20.6■□□□□ 0.89
Lsm8Q6ZWM4 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.6■□□□□ 0.89
Lsm8Q6ZWM4 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.6■□□□□ 0.89
Lsm8Q6ZWM4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lsm8Q6ZWM4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Lsm8Q6ZWM4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lsm8Q6ZWM4 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Lsm8Q6ZWM4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lsm8Q6ZWM4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lsm8Q6ZWM4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Lsm8Q6ZWM4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Lsm8Q6ZWM4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Lsm8Q6ZWM4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm8Q6ZWM4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm8Q6ZWM4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.59■□□□□ 0.89
Lsm8Q6ZWM4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm8Q6ZWM4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm8Q6ZWM4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm8Q6ZWM4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm8Q6ZWM4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Lsm8Q6ZWM4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Lsm8Q6ZWM4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.58■□□□□ 0.89
Lsm8Q6ZWM4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Lsm8Q6ZWM4 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.58■□□□□ 0.89
Lsm8Q6ZWM4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lsm8Q6ZWM4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lsm8Q6ZWM4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Lsm8Q6ZWM4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Lsm8Q6ZWM4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Lsm8Q6ZWM4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Lsm8Q6ZWM4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Lsm8Q6ZWM4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm8Q6ZWM4 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm8Q6ZWM4 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm8Q6ZWM4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm8Q6ZWM4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.57■□□□□ 0.88
Lsm8Q6ZWM4 Serp2-204ENSMUST00000228055 705 ntBASIC20.57■□□□□ 0.88
Lsm8Q6ZWM4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm8Q6ZWM4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Lsm8Q6ZWM4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm8Q6ZWM4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm8Q6ZWM4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Lsm8Q6ZWM4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Lsm8Q6ZWM4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Lsm8Q6ZWM4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms