Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Npc1l1Q6T3U4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Npc1l1Q6T3U4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Npc1l1Q6T3U4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Npc1l1Q6T3U4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Npc1l1Q6T3U4 Gm43909-201ENSMUST00000203443 1876 ntBASIC23.69■■□□□ 1.38
Npc1l1Q6T3U4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Npc1l1Q6T3U4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Npc1l1Q6T3U4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC23.68■■□□□ 1.38
Npc1l1Q6T3U4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Npc1l1Q6T3U4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Npc1l1Q6T3U4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Npc1l1Q6T3U4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC23.68■■□□□ 1.38
Npc1l1Q6T3U4 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Npc1l1Q6T3U4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Npc1l1Q6T3U4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
Npc1l1Q6T3U4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC23.67■■□□□ 1.38
Npc1l1Q6T3U4 Gm10033-202ENSMUST00000211874 928 ntBASIC23.67■■□□□ 1.38
Npc1l1Q6T3U4 Gm18671-201ENSMUST00000214826 683 ntBASIC23.67■■□□□ 1.38
Npc1l1Q6T3U4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Npc1l1Q6T3U4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Npc1l1Q6T3U4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC23.67■■□□□ 1.38
Npc1l1Q6T3U4 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.67■■□□□ 1.38
Npc1l1Q6T3U4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Npc1l1Q6T3U4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Npc1l1Q6T3U4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC23.66■■□□□ 1.38
Npc1l1Q6T3U4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC23.66■■□□□ 1.38
Npc1l1Q6T3U4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Npc1l1Q6T3U4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
Npc1l1Q6T3U4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Npc1l1Q6T3U4 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Npc1l1Q6T3U4 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
Npc1l1Q6T3U4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Npc1l1Q6T3U4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Npc1l1Q6T3U4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Npc1l1Q6T3U4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Npc1l1Q6T3U4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Npc1l1Q6T3U4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Npc1l1Q6T3U4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC23.65■■□□□ 1.38
Npc1l1Q6T3U4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Npc1l1Q6T3U4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Npc1l1Q6T3U4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Npc1l1Q6T3U4 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Npc1l1Q6T3U4 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Npc1l1Q6T3U4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Npc1l1Q6T3U4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Npc1l1Q6T3U4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Npc1l1Q6T3U4 AV356131-201ENSMUST00000206201 750 ntBASIC23.63■■□□□ 1.37
Npc1l1Q6T3U4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Npc1l1Q6T3U4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Npc1l1Q6T3U4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Npc1l1Q6T3U4 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Npc1l1Q6T3U4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Npc1l1Q6T3U4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Npc1l1Q6T3U4 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Npc1l1Q6T3U4 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC23.62■■□□□ 1.37
Npc1l1Q6T3U4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC23.62■■□□□ 1.37
Npc1l1Q6T3U4 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.62■■□□□ 1.37
Npc1l1Q6T3U4 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Npc1l1Q6T3U4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Npc1l1Q6T3U4 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Npc1l1Q6T3U4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Npc1l1Q6T3U4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Npc1l1Q6T3U4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Npc1l1Q6T3U4 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
Npc1l1Q6T3U4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Npc1l1Q6T3U4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Npc1l1Q6T3U4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Npc1l1Q6T3U4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Npc1l1Q6T3U4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Npc1l1Q6T3U4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Npc1l1Q6T3U4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Npc1l1Q6T3U4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Npc1l1Q6T3U4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
Npc1l1Q6T3U4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Npc1l1Q6T3U4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Npc1l1Q6T3U4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Npc1l1Q6T3U4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Npc1l1Q6T3U4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Npc1l1Q6T3U4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Npc1l1Q6T3U4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Npc1l1Q6T3U4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Npc1l1Q6T3U4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Npc1l1Q6T3U4 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC23.59■■□□□ 1.37
Npc1l1Q6T3U4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Npc1l1Q6T3U4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC23.59■■□□□ 1.37
Npc1l1Q6T3U4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Npc1l1Q6T3U4 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC23.59■■□□□ 1.37
Npc1l1Q6T3U4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Npc1l1Q6T3U4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.59■■□□□ 1.37
Npc1l1Q6T3U4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Npc1l1Q6T3U4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC23.59■■□□□ 1.37
Npc1l1Q6T3U4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Npc1l1Q6T3U4 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Npc1l1Q6T3U4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Npc1l1Q6T3U4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Npc1l1Q6T3U4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Npc1l1Q6T3U4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Npc1l1Q6T3U4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC23.58■■□□□ 1.37
Npc1l1Q6T3U4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms