Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shc4Q6S5L9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shc4Q6S5L9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shc4Q6S5L9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shc4Q6S5L9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shc4Q6S5L9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Shc4Q6S5L9 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shc4Q6S5L9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Shc4Q6S5L9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Shc4Q6S5L9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shc4Q6S5L9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Shc4Q6S5L9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shc4Q6S5L9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.34■□□□□ 0.53
Shc4Q6S5L9 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Shc4Q6S5L9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.34■□□□□ 0.53
Shc4Q6S5L9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shc4Q6S5L9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Shc4Q6S5L9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shc4Q6S5L9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shc4Q6S5L9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shc4Q6S5L9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shc4Q6S5L9 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.33■□□□□ 0.52
Shc4Q6S5L9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Shc4Q6S5L9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shc4Q6S5L9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shc4Q6S5L9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shc4Q6S5L9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shc4Q6S5L9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Shc4Q6S5L9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shc4Q6S5L9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Shc4Q6S5L9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Shc4Q6S5L9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shc4Q6S5L9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shc4Q6S5L9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shc4Q6S5L9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shc4Q6S5L9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shc4Q6S5L9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Shc4Q6S5L9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shc4Q6S5L9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.32■□□□□ 0.52
Shc4Q6S5L9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shc4Q6S5L9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.32■□□□□ 0.52
Shc4Q6S5L9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shc4Q6S5L9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Shc4Q6S5L9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shc4Q6S5L9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shc4Q6S5L9 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shc4Q6S5L9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shc4Q6S5L9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shc4Q6S5L9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Shc4Q6S5L9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.31■□□□□ 0.52
Shc4Q6S5L9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shc4Q6S5L9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shc4Q6S5L9 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shc4Q6S5L9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shc4Q6S5L9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Shc4Q6S5L9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shc4Q6S5L9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Shc4Q6S5L9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shc4Q6S5L9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.3■□□□□ 0.52
Shc4Q6S5L9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.3■□□□□ 0.52
Shc4Q6S5L9 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.3■□□□□ 0.52
Shc4Q6S5L9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shc4Q6S5L9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Shc4Q6S5L9 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shc4Q6S5L9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shc4Q6S5L9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shc4Q6S5L9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.3■□□□□ 0.52
Shc4Q6S5L9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shc4Q6S5L9 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.29■□□□□ 0.52
Shc4Q6S5L9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shc4Q6S5L9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shc4Q6S5L9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shc4Q6S5L9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
Shc4Q6S5L9 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.29■□□□□ 0.52
Shc4Q6S5L9 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.29■□□□□ 0.52
Shc4Q6S5L9 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.29■□□□□ 0.52
Shc4Q6S5L9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.29■□□□□ 0.52
Shc4Q6S5L9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shc4Q6S5L9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shc4Q6S5L9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shc4Q6S5L9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shc4Q6S5L9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shc4Q6S5L9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shc4Q6S5L9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shc4Q6S5L9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shc4Q6S5L9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shc4Q6S5L9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shc4Q6S5L9 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shc4Q6S5L9 Gm11421-201ENSMUST00000122124 294 ntBASIC18.28■□□□□ 0.52
Shc4Q6S5L9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.28■□□□□ 0.52
Shc4Q6S5L9 Gm42642-201ENSMUST00000200683 355 ntBASIC18.28■□□□□ 0.52
Shc4Q6S5L9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Shc4Q6S5L9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shc4Q6S5L9 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shc4Q6S5L9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shc4Q6S5L9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shc4Q6S5L9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.27■□□□□ 0.52
Shc4Q6S5L9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.27■□□□□ 0.52
Shc4Q6S5L9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Shc4Q6S5L9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms