Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 Gm42778-201ENSMUST00000199644 553 ntBASIC20.67■□□□□ 0.9
Prrt3Q6PE13 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Prrt3Q6PE13 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.67■□□□□ 0.9
Prrt3Q6PE13 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Prrt3Q6PE13 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prrt3Q6PE13 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prrt3Q6PE13 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.66■□□□□ 0.9
Prrt3Q6PE13 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.66■□□□□ 0.9
Prrt3Q6PE13 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prrt3Q6PE13 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Prrt3Q6PE13 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Prrt3Q6PE13 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Prrt3Q6PE13 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prrt3Q6PE13 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prrt3Q6PE13 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.65■□□□□ 0.9
Prrt3Q6PE13 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Prrt3Q6PE13 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.65■□□□□ 0.9
Prrt3Q6PE13 Gm9988-201ENSMUST00000069786 435 ntBASIC20.65■□□□□ 0.9
Prrt3Q6PE13 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Prrt3Q6PE13 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Prrt3Q6PE13 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prrt3Q6PE13 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.64■□□□□ 0.89
Prrt3Q6PE13 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prrt3Q6PE13 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prrt3Q6PE13 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prrt3Q6PE13 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Prrt3Q6PE13 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prrt3Q6PE13 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.64■□□□□ 0.89
Prrt3Q6PE13 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Prrt3Q6PE13 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.64■□□□□ 0.89
Prrt3Q6PE13 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Prrt3Q6PE13 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prrt3Q6PE13 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prrt3Q6PE13 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prrt3Q6PE13 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prrt3Q6PE13 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Prrt3Q6PE13 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Prrt3Q6PE13 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prrt3Q6PE13 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.63■□□□□ 0.89
Prrt3Q6PE13 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
Prrt3Q6PE13 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prrt3Q6PE13 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prrt3Q6PE13 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Prrt3Q6PE13 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Prrt3Q6PE13 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.63■□□□□ 0.89
Prrt3Q6PE13 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Prrt3Q6PE13 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prrt3Q6PE13 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prrt3Q6PE13 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prrt3Q6PE13 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prrt3Q6PE13 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prrt3Q6PE13 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.62■□□□□ 0.89
Prrt3Q6PE13 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Prrt3Q6PE13 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prrt3Q6PE13 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.62■□□□□ 0.89
Prrt3Q6PE13 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prrt3Q6PE13 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Prrt3Q6PE13 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prrt3Q6PE13 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prrt3Q6PE13 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Prrt3Q6PE13 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Prrt3Q6PE13 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prrt3Q6PE13 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prrt3Q6PE13 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prrt3Q6PE13 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prrt3Q6PE13 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Prrt3Q6PE13 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Prrt3Q6PE13 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.61■□□□□ 0.89
Prrt3Q6PE13 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.61■□□□□ 0.89
Prrt3Q6PE13 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Reep4-203ENSMUST00000226563 1444 ntBASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Prrt3Q6PE13 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prrt3Q6PE13 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prrt3Q6PE13 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prrt3Q6PE13 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prrt3Q6PE13 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Prrt3Q6PE13 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Prrt3Q6PE13 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Prrt3Q6PE13 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Prrt3Q6PE13 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Prrt3Q6PE13 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms