Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Rnf220Q6PDX6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf220Q6PDX6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.54■□□□□ 0.56
Rnf220Q6PDX6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf220Q6PDX6 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rnf220Q6PDX6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 Gm12366-201ENSMUST00000121722 873 ntBASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 Gm5786-201ENSMUST00000085368 882 ntBASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rnf220Q6PDX6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf220Q6PDX6 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf220Q6PDX6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf220Q6PDX6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf220Q6PDX6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf220Q6PDX6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf220Q6PDX6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rnf220Q6PDX6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Rnf220Q6PDX6 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf220Q6PDX6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf220Q6PDX6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rnf220Q6PDX6 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf220Q6PDX6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf220Q6PDX6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf220Q6PDX6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.51■□□□□ 0.55
Rnf220Q6PDX6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rnf220Q6PDX6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf220Q6PDX6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rnf220Q6PDX6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.51■□□□□ 0.55
Rnf220Q6PDX6 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf220Q6PDX6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rnf220Q6PDX6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf220Q6PDX6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rnf220Q6PDX6 Gm10420-201ENSMUST00000121713 882 ntBASIC18.5■□□□□ 0.55
Rnf220Q6PDX6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf220Q6PDX6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf220Q6PDX6 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf220Q6PDX6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rnf220Q6PDX6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.5■□□□□ 0.55
Rnf220Q6PDX6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.5■□□□□ 0.55
Rnf220Q6PDX6 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rnf220Q6PDX6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf220Q6PDX6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf220Q6PDX6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf220Q6PDX6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf220Q6PDX6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf220Q6PDX6 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.48■□□□□ 0.55
Rnf220Q6PDX6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf220Q6PDX6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf220Q6PDX6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf220Q6PDX6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf220Q6PDX6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf220Q6PDX6 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Rnf220Q6PDX6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf220Q6PDX6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rnf220Q6PDX6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf220Q6PDX6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf220Q6PDX6 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf220Q6PDX6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf220Q6PDX6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf220Q6PDX6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rnf220Q6PDX6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rnf220Q6PDX6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf220Q6PDX6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf220Q6PDX6 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rnf220Q6PDX6 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.46■□□□□ 0.55
Rnf220Q6PDX6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms