Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim37Q6PCX9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Trim37Q6PCX9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Trim37Q6PCX9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim37Q6PCX9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim37Q6PCX9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim37Q6PCX9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim37Q6PCX9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
Trim37Q6PCX9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.77■■□□□ 1.08
Trim37Q6PCX9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Trim37Q6PCX9 Gm10653-202ENSMUST00000139570 835 ntBASIC21.77■■□□□ 1.08
Trim37Q6PCX9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.77■■□□□ 1.08
Trim37Q6PCX9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.77■■□□□ 1.08
Trim37Q6PCX9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim37Q6PCX9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trim37Q6PCX9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Trim37Q6PCX9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Trim37Q6PCX9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.77■■□□□ 1.07
Trim37Q6PCX9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim37Q6PCX9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim37Q6PCX9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Trim37Q6PCX9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Trim37Q6PCX9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim37Q6PCX9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim37Q6PCX9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim37Q6PCX9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Trim37Q6PCX9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim37Q6PCX9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trim37Q6PCX9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.76■■□□□ 1.07
Trim37Q6PCX9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Trim37Q6PCX9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Trim37Q6PCX9 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Trim37Q6PCX9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim37Q6PCX9 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim37Q6PCX9 Mir7071-201ENSMUST00000184847 69 ntBASIC21.75■■□□□ 1.07
Trim37Q6PCX9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim37Q6PCX9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim37Q6PCX9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Trim37Q6PCX9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Trim37Q6PCX9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim37Q6PCX9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trim37Q6PCX9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Trim37Q6PCX9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim37Q6PCX9 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Trim37Q6PCX9 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
Trim37Q6PCX9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.74■■□□□ 1.07
Trim37Q6PCX9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Trim37Q6PCX9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.74■■□□□ 1.07
Trim37Q6PCX9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim37Q6PCX9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim37Q6PCX9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim37Q6PCX9 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.74■■□□□ 1.07
Trim37Q6PCX9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim37Q6PCX9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim37Q6PCX9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim37Q6PCX9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trim37Q6PCX9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Trim37Q6PCX9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim37Q6PCX9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.73■■□□□ 1.07
Trim37Q6PCX9 Gm22240-201ENSMUST00000175225 82 ntBASIC21.73■■□□□ 1.07
Trim37Q6PCX9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.73■■□□□ 1.07
Trim37Q6PCX9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim37Q6PCX9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.73■■□□□ 1.07
Trim37Q6PCX9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Trim37Q6PCX9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Trim37Q6PCX9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trim37Q6PCX9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim37Q6PCX9 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim37Q6PCX9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.72■■□□□ 1.07
Trim37Q6PCX9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim37Q6PCX9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.72■■□□□ 1.07
Trim37Q6PCX9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.72■■□□□ 1.07
Trim37Q6PCX9 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim37Q6PCX9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.72■■□□□ 1.07
Trim37Q6PCX9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim37Q6PCX9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Trim37Q6PCX9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trim37Q6PCX9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim37Q6PCX9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim37Q6PCX9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trim37Q6PCX9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim37Q6PCX9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
Trim37Q6PCX9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim37Q6PCX9 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim37Q6PCX9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim37Q6PCX9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim37Q6PCX9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim37Q6PCX9 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.71■■□□□ 1.07
Trim37Q6PCX9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC21.71■■□□□ 1.07
Trim37Q6PCX9 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Trim37Q6PCX9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim37Q6PCX9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trim37Q6PCX9 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.71■■□□□ 1.07
Trim37Q6PCX9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Trim37Q6PCX9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trim37Q6PCX9 Gm12441-201ENSMUST00000121806 588 ntBASIC21.7■■□□□ 1.06
Trim37Q6PCX9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.7■■□□□ 1.06
Trim37Q6PCX9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.7■■□□□ 1.06
Trim37Q6PCX9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trim37Q6PCX9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms