Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf6Q6NVF9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.01■□□□□ 0.63
Cpsf6Q6NVF9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf6Q6NVF9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.01■□□□□ 0.63
Cpsf6Q6NVF9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf6Q6NVF9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf6Q6NVF9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Cpsf6Q6NVF9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf6Q6NVF9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Cpsf6Q6NVF9 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.01■□□□□ 0.63
Cpsf6Q6NVF9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.01■□□□□ 0.63
Cpsf6Q6NVF9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf6Q6NVF9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf6Q6NVF9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf6Q6NVF9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf6Q6NVF9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf6Q6NVF9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf6Q6NVF9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cpsf6Q6NVF9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19■□□□□ 0.63
Cpsf6Q6NVF9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cpsf6Q6NVF9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf6Q6NVF9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf6Q6NVF9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf6Q6NVF9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf6Q6NVF9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf6Q6NVF9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf6Q6NVF9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cpsf6Q6NVF9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf6Q6NVF9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cpsf6Q6NVF9 Gm27045-201ENSMUST00000182145 1402 ntBASIC19■□□□□ 0.63
Cpsf6Q6NVF9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf6Q6NVF9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
Cpsf6Q6NVF9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.99■□□□□ 0.63
Cpsf6Q6NVF9 Golgb1-201ENSMUST00000023534 498 ntBASIC18.99■□□□□ 0.63
Cpsf6Q6NVF9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf6Q6NVF9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cpsf6Q6NVF9 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.98■□□□□ 0.63
Cpsf6Q6NVF9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Cpsf6Q6NVF9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cpsf6Q6NVF9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cpsf6Q6NVF9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf6Q6NVF9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.98■□□□□ 0.63
Cpsf6Q6NVF9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf6Q6NVF9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf6Q6NVF9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.98■□□□□ 0.63
Cpsf6Q6NVF9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf6Q6NVF9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.98■□□□□ 0.63
Cpsf6Q6NVF9 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf6Q6NVF9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf6Q6NVF9 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cpsf6Q6NVF9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cpsf6Q6NVF9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.97■□□□□ 0.63
Cpsf6Q6NVF9 Gm12922-201ENSMUST00000120626 809 ntBASIC18.97■□□□□ 0.63
Cpsf6Q6NVF9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Cpsf6Q6NVF9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Cpsf6Q6NVF9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Cpsf6Q6NVF9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf6Q6NVF9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf6Q6NVF9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf6Q6NVF9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cpsf6Q6NVF9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
Cpsf6Q6NVF9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf6Q6NVF9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.96■□□□□ 0.63
Cpsf6Q6NVF9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf6Q6NVF9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.96■□□□□ 0.63
Cpsf6Q6NVF9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf6Q6NVF9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf6Q6NVF9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cpsf6Q6NVF9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf6Q6NVF9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf6Q6NVF9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf6Q6NVF9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cpsf6Q6NVF9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf6Q6NVF9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf6Q6NVF9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf6Q6NVF9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cpsf6Q6NVF9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Cpsf6Q6NVF9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf6Q6NVF9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Cpsf6Q6NVF9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf6Q6NVF9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf6Q6NVF9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.94■□□□□ 0.62
Cpsf6Q6NVF9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf6Q6NVF9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cpsf6Q6NVF9 Iqck-206ENSMUST00000208658 2891 ntBASIC18.94■□□□□ 0.62
Cpsf6Q6NVF9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Cpsf6Q6NVF9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf6Q6NVF9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.93■□□□□ 0.62
Cpsf6Q6NVF9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf6Q6NVF9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf6Q6NVF9 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.93■□□□□ 0.62
Cpsf6Q6NVF9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cpsf6Q6NVF9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.93■□□□□ 0.62
Cpsf6Q6NVF9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.93■□□□□ 0.62
Cpsf6Q6NVF9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf6Q6NVF9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf6Q6NVF9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Cpsf6Q6NVF9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Cpsf6Q6NVF9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.92■□□□□ 0.62
Cpsf6Q6NVF9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms