Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Six3Q62233 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.18■□□□□ 0.66
Six3Q62233 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six3Q62233 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Six3Q62233 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six3Q62233 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six3Q62233 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Six3Q62233 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Six3Q62233 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.17■□□□□ 0.66
Six3Q62233 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Six3Q62233 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Six3Q62233 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Six3Q62233 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six3Q62233 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six3Q62233 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six3Q62233 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Six3Q62233 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six3Q62233 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Six3Q62233 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six3Q62233 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six3Q62233 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.16■□□□□ 0.66
Six3Q62233 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.16■□□□□ 0.66
Six3Q62233 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six3Q62233 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six3Q62233 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six3Q62233 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Six3Q62233 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Six3Q62233 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Six3Q62233 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Six3Q62233 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Six3Q62233 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Six3Q62233 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Six3Q62233 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Six3Q62233 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Six3Q62233 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Six3Q62233 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.15■□□□□ 0.66
Six3Q62233 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Six3Q62233 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Six3Q62233 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Six3Q62233 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Six3Q62233 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Six3Q62233 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Six3Q62233 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.14■□□□□ 0.65
Six3Q62233 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
Six3Q62233 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six3Q62233 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Six3Q62233 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Six3Q62233 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six3Q62233 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six3Q62233 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six3Q62233 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.13■□□□□ 0.65
Six3Q62233 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Six3Q62233 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.13■□□□□ 0.65
Six3Q62233 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six3Q62233 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six3Q62233 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.13■□□□□ 0.65
Six3Q62233 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Six3Q62233 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Six3Q62233 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Six3Q62233 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Six3Q62233 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six3Q62233 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six3Q62233 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.12■□□□□ 0.65
Six3Q62233 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Six3Q62233 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Six3Q62233 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.12■□□□□ 0.65
Six3Q62233 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six3Q62233 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.12■□□□□ 0.65
Six3Q62233 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six3Q62233 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Six3Q62233 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six3Q62233 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six3Q62233 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six3Q62233 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Six3Q62233 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six3Q62233 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six3Q62233 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six3Q62233 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.11■□□□□ 0.65
Six3Q62233 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Six3Q62233 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six3Q62233 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six3Q62233 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Six3Q62233 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Six3Q62233 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six3Q62233 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.1■□□□□ 0.65
Six3Q62233 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six3Q62233 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six3Q62233 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Six3Q62233 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six3Q62233 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Six3Q62233 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six3Q62233 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six3Q62233 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six3Q62233 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Six3Q62233 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six3Q62233 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six3Q62233 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Six3Q62233 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Six3Q62233 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.08■□□□□ 0.65
Six3Q62233 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms