Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Foxc1Q61572 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc1Q61572 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxc1Q61572 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.28□□□□□ -0.12
Foxc1Q61572 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxc1Q61572 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Foxc1Q61572 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxc1Q61572 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxc1Q61572 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxc1Q61572 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Foxc1Q61572 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Foxc1Q61572 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.27□□□□□ -0.13
Foxc1Q61572 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Foxc1Q61572 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Foxc1Q61572 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxc1Q61572 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Foxc1Q61572 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.27□□□□□ -0.13
Foxc1Q61572 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxc1Q61572 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxc1Q61572 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC14.27□□□□□ -0.13
Foxc1Q61572 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc1Q61572 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc1Q61572 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc1Q61572 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc1Q61572 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Foxc1Q61572 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc1Q61572 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc1Q61572 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc1Q61572 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc1Q61572 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Foxc1Q61572 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.26□□□□□ -0.13
Foxc1Q61572 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc1Q61572 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc1Q61572 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Foxc1Q61572 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Foxc1Q61572 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.26□□□□□ -0.13
Foxc1Q61572 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Foxc1Q61572 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc1Q61572 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxc1Q61572 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc1Q61572 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc1Q61572 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc1Q61572 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Foxc1Q61572 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc1Q61572 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc1Q61572 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc1Q61572 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.25□□□□□ -0.13
Foxc1Q61572 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc1Q61572 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc1Q61572 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc1Q61572 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
Foxc1Q61572 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.25□□□□□ -0.13
Foxc1Q61572 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.25□□□□□ -0.13
Foxc1Q61572 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.25□□□□□ -0.13
Foxc1Q61572 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
Foxc1Q61572 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc1Q61572 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc1Q61572 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Foxc1Q61572 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxc1Q61572 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxc1Q61572 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxc1Q61572 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxc1Q61572 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxc1Q61572 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxc1Q61572 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.24□□□□□ -0.13
Foxc1Q61572 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxc1Q61572 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Foxc1Q61572 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxc1Q61572 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Foxc1Q61572 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.24□□□□□ -0.13
Foxc1Q61572 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxc1Q61572 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Foxc1Q61572 Mir7075-201ENSMUST00000184187 82 ntBASIC14.24□□□□□ -0.13
Foxc1Q61572 Gm15823-201ENSMUST00000064305 670 ntBASIC14.24□□□□□ -0.13
Foxc1Q61572 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxc1Q61572 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxc1Q61572 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxc1Q61572 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxc1Q61572 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxc1Q61572 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxc1Q61572 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Foxc1Q61572 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxc1Q61572 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxc1Q61572 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxc1Q61572 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Foxc1Q61572 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxc1Q61572 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Foxc1Q61572 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Foxc1Q61572 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxc1Q61572 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxc1Q61572 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxc1Q61572 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.23□□□□□ -0.13
Foxc1Q61572 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.23□□□□□ -0.13
Foxc1Q61572 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxc1Q61572 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxc1Q61572 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxc1Q61572 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Foxc1Q61572 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxc1Q61572 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxc1Q61572 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms