Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdf4Q61112 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdf4Q61112 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdf4Q61112 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdf4Q61112 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdf4Q61112 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.91■□□□□ 0.78
Sdf4Q61112 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.91■□□□□ 0.78
Sdf4Q61112 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Sdf4Q61112 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdf4Q61112 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sdf4Q61112 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdf4Q61112 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Sdf4Q61112 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.9■□□□□ 0.78
Sdf4Q61112 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sdf4Q61112 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Sdf4Q61112 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Sdf4Q61112 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Sdf4Q61112 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdf4Q61112 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdf4Q61112 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdf4Q61112 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdf4Q61112 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.9■□□□□ 0.78
Sdf4Q61112 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sdf4Q61112 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sdf4Q61112 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.89■□□□□ 0.77
Sdf4Q61112 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.89■□□□□ 0.77
Sdf4Q61112 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sdf4Q61112 Spcs1-204ENSMUST00000226782 949 ntBASIC19.89■□□□□ 0.77
Sdf4Q61112 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sdf4Q61112 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sdf4Q61112 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sdf4Q61112 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sdf4Q61112 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Sdf4Q61112 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sdf4Q61112 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Sdf4Q61112 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.88■□□□□ 0.77
Sdf4Q61112 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.88■□□□□ 0.77
Sdf4Q61112 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sdf4Q61112 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Sdf4Q61112 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sdf4Q61112 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdf4Q61112 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Sdf4Q61112 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Sdf4Q61112 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdf4Q61112 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdf4Q61112 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Sdf4Q61112 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdf4Q61112 Gm27454-201ENSMUST00000185090 204 ntBASIC19.87■□□□□ 0.77
Sdf4Q61112 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdf4Q61112 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdf4Q61112 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.87■□□□□ 0.77
Sdf4Q61112 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdf4Q61112 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sdf4Q61112 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Sdf4Q61112 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdf4Q61112 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdf4Q61112 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdf4Q61112 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Sdf4Q61112 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdf4Q61112 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.86■□□□□ 0.77
Sdf4Q61112 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sdf4Q61112 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Sdf4Q61112 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdf4Q61112 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdf4Q61112 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdf4Q61112 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Sdf4Q61112 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdf4Q61112 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdf4Q61112 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Sdf4Q61112 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sdf4Q61112 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sdf4Q61112 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Sdf4Q61112 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.85■□□□□ 0.77
Sdf4Q61112 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.84■□□□□ 0.77
Sdf4Q61112 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sdf4Q61112 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Sdf4Q61112 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sdf4Q61112 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.84■□□□□ 0.77
Sdf4Q61112 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Sdf4Q61112 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sdf4Q61112 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sdf4Q61112 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Sdf4Q61112 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sdf4Q61112 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sdf4Q61112 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Sdf4Q61112 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.83■□□□□ 0.77
Sdf4Q61112 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sdf4Q61112 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sdf4Q61112 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sdf4Q61112 Mir7075-201ENSMUST00000184187 82 ntBASIC19.83■□□□□ 0.77
Sdf4Q61112 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.83■□□□□ 0.77
Sdf4Q61112 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Sdf4Q61112 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
Sdf4Q61112 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sdf4Q61112 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sdf4Q61112 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sdf4Q61112 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sdf4Q61112 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Sdf4Q61112 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Sdf4Q61112 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms